Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP3Q9BWW4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 FOSL1P1-201ENST00000511041 816 ntBASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 AC138894.3-201ENST00000603787 634 ntBASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP3Q9BWW4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SSBP3Q9BWW4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SSBP3Q9BWW4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SSBP3Q9BWW4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SSBP3Q9BWW4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SSBP3Q9BWW4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SSBP3Q9BWW4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 AC068472.1-201ENST00000474589 881 ntBASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 NSUN5P1-202ENST00000421140 1535 ntBASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 NSUN5P2-203ENST00000457352 1529 ntBASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SSBP3Q9BWW4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms