Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC25.57■■□□□ 1.68
SCAF11Q99590 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC25.57■■□□□ 1.68
SCAF11Q99590 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
SCAF11Q99590 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC25.57■■□□□ 1.68
SCAF11Q99590 CEND1P1-201ENST00000451006 455 ntBASIC25.57■■□□□ 1.68
SCAF11Q99590 AP000344.2-201ENST00000512987 629 ntBASIC25.57■■□□□ 1.68
SCAF11Q99590 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC25.57■■□□□ 1.68
SCAF11Q99590 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC25.57■■□□□ 1.68
SCAF11Q99590 RNF34-208ENST00000555076 593 ntTSL 3 BASIC25.57■■□□□ 1.68
SCAF11Q99590 AL031432.2-201ENST00000566714 459 ntBASIC25.57■■□□□ 1.68
SCAF11Q99590 AL928711.1-201ENST00000570165 459 ntBASIC25.57■■□□□ 1.68
SCAF11Q99590 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC25.57■■□□□ 1.68
SCAF11Q99590 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SCAF11Q99590 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
SCAF11Q99590 AC004706.3-202ENST00000621574 984 ntBASIC25.57■■□□□ 1.68
SCAF11Q99590 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SCAF11Q99590 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SCAF11Q99590 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SCAF11Q99590 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SCAF11Q99590 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SCAF11Q99590 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SCAF11Q99590 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
SCAF11Q99590 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SCAF11Q99590 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SCAF11Q99590 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SCAF11Q99590 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SCAF11Q99590 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC25.56■■□□□ 1.68
SCAF11Q99590 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC25.56■■□□□ 1.68
SCAF11Q99590 IGLL3P-201ENST00000412472 434 ntBASIC25.56■■□□□ 1.68
SCAF11Q99590 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC25.56■■□□□ 1.68
SCAF11Q99590 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SCAF11Q99590 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC25.56■■□□□ 1.68
SCAF11Q99590 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
SCAF11Q99590 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC25.56■■□□□ 1.68
SCAF11Q99590 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SCAF11Q99590 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SCAF11Q99590 AC073592.3-201ENST00000625118 1834 ntBASIC25.56■■□□□ 1.68
SCAF11Q99590 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SCAF11Q99590 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC25.56■■□□□ 1.68
SCAF11Q99590 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SCAF11Q99590 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
SCAF11Q99590 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SCAF11Q99590 AL139400.1-201ENST00000366220 510 ntBASIC25.55■■□□□ 1.68
SCAF11Q99590 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SCAF11Q99590 VN2R19P-201ENST00000442399 1052 ntBASIC25.55■■□□□ 1.68
SCAF11Q99590 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC25.55■■□□□ 1.68
SCAF11Q99590 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
SCAF11Q99590 CIPC-205ENST00000555437 566 ntTSL 3 BASIC25.55■■□□□ 1.68
SCAF11Q99590 PDPK2P-202ENST00000562415 1191 ntBASIC25.55■■□□□ 1.68
SCAF11Q99590 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC25.55■■□□□ 1.68
SCAF11Q99590 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SCAF11Q99590 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SCAF11Q99590 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SCAF11Q99590 AC006504.4-201ENST00000592118 1568 ntBASIC25.55■■□□□ 1.68
SCAF11Q99590 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SCAF11Q99590 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC25.55■■□□□ 1.68
SCAF11Q99590 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SCAF11Q99590 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SCAF11Q99590 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC25.54■■□□□ 1.68
SCAF11Q99590 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
SCAF11Q99590 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SCAF11Q99590 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SCAF11Q99590 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SCAF11Q99590 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SCAF11Q99590 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC25.54■■□□□ 1.68
SCAF11Q99590 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SCAF11Q99590 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SCAF11Q99590 PRSS29P-201ENST00000440800 595 ntBASIC25.54■■□□□ 1.68
SCAF11Q99590 AC244107.1-201ENST00000442033 332 ntBASIC25.54■■□□□ 1.68
SCAF11Q99590 AC122714.2-201ENST00000502787 707 ntBASIC25.54■■□□□ 1.68
SCAF11Q99590 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC25.54■■□□□ 1.68
SCAF11Q99590 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
SCAF11Q99590 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC25.54■■□□□ 1.68
SCAF11Q99590 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC25.54■■□□□ 1.68
SCAF11Q99590 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC25.54■■□□□ 1.68
SCAF11Q99590 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC25.54■■□□□ 1.68
SCAF11Q99590 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC25.54■■□□□ 1.68
SCAF11Q99590 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SCAF11Q99590 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SCAF11Q99590 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SCAF11Q99590 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SCAF11Q99590 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC25.54■■□□□ 1.68
SCAF11Q99590 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SCAF11Q99590 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SCAF11Q99590 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SCAF11Q99590 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC25.53■■□□□ 1.68
SCAF11Q99590 ARTN-206ENST00000472435 402 ntTSL 3 BASIC25.53■■□□□ 1.68
SCAF11Q99590 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC25.53■■□□□ 1.68
SCAF11Q99590 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
SCAF11Q99590 PRR29-209ENST00000582540 967 ntTSL 2 BASIC25.53■■□□□ 1.68
SCAF11Q99590 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC25.53■■□□□ 1.68
SCAF11Q99590 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC25.53■■□□□ 1.68
SCAF11Q99590 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC25.53■■□□□ 1.68
SCAF11Q99590 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC25.53■■□□□ 1.68
SCAF11Q99590 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
SCAF11Q99590 BX323043.1-201ENST00000641006 1765 ntBASIC25.53■■□□□ 1.68
SCAF11Q99590 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SCAF11Q99590 GOLGA6L17P-202ENST00000614358 1398 ntBASIC25.53■■□□□ 1.68
SCAF11Q99590 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SCAF11Q99590 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms