Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCC1Q96S66 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.16■□□□□ 0.02
CLCC1Q96S66 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCC1Q96S66 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLCC1Q96S66 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCC1Q96S66 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CLCC1Q96S66 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CLCC1Q96S66 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCC1Q96S66 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCC1Q96S66 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCC1Q96S66 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CLCC1Q96S66 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCC1Q96S66 FAM207BP-201ENST00000447172 505 ntBASIC15.15■□□□□ 0.02
CLCC1Q96S66 AC008040.2-201ENST00000461049 708 ntBASIC15.15■□□□□ 0.02
CLCC1Q96S66 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.15■□□□□ 0.02
CLCC1Q96S66 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.15■□□□□ 0.02
CLCC1Q96S66 Z99916.2-201ENST00000604037 246 ntBASIC15.15■□□□□ 0.02
CLCC1Q96S66 AP001412.1-201ENST00000608405 714 ntBASIC15.15■□□□□ 0.02
CLCC1Q96S66 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.15■□□□□ 0.02
CLCC1Q96S66 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.15■□□□□ 0.02
CLCC1Q96S66 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CLCC1Q96S66 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCC1Q96S66 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCC1Q96S66 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.15■□□□□ 0.02
CLCC1Q96S66 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLCC1Q96S66 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCC1Q96S66 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
CLCC1Q96S66 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.15■□□□□ 0.02
CLCC1Q96S66 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCC1Q96S66 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 AD000864.1-201ENST00000624076 2295 ntBASIC15.14■□□□□ 0.01
CLCC1Q96S66 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCC1Q96S66 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 AC135776.1-201ENST00000319817 2481 ntBASIC15.14■□□□□ 0.01
CLCC1Q96S66 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 AL355355.2-201ENST00000442321 338 ntBASIC15.14■□□□□ 0.01
CLCC1Q96S66 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLCC1Q96S66 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 AC113410.3-201ENST00000623366 203 ntBASIC15.14■□□□□ 0.01
CLCC1Q96S66 AL049637.2-201ENST00000641778 930 ntBASIC15.14■□□□□ 0.01
CLCC1Q96S66 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCC1Q96S66 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCC1Q96S66 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCC1Q96S66 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCC1Q96S66 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLCC1Q96S66 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCC1Q96S66 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.14■□□□□ 0.01
CLCC1Q96S66 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLCC1Q96S66 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCC1Q96S66 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCC1Q96S66 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CLCC1Q96S66 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCC1Q96S66 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CLCC1Q96S66 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCC1Q96S66 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CLCC1Q96S66 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCC1Q96S66 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CLCC1Q96S66 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.13■□□□□ 0.01
CLCC1Q96S66 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCC1Q96S66 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCC1Q96S66 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.13■□□□□ 0.01
CLCC1Q96S66 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCC1Q96S66 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCC1Q96S66 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCC1Q96S66 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCC1Q96S66 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCC1Q96S66 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCC1Q96S66 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCC1Q96S66 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCC1Q96S66 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.13■□□□□ 0.01
CLCC1Q96S66 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.13■□□□□ 0.01
CLCC1Q96S66 B3GAT3P1-201ENST00000471720 806 ntBASIC15.13■□□□□ 0.01
CLCC1Q96S66 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
CLCC1Q96S66 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.13■□□□□ 0.01
CLCC1Q96S66 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.13■□□□□ 0.01
CLCC1Q96S66 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.13■□□□□ 0.01
CLCC1Q96S66 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.13■□□□□ 0.01
CLCC1Q96S66 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.13■□□□□ 0.01
CLCC1Q96S66 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCC1Q96S66 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CLCC1Q96S66 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.13■□□□□ 0.01
CLCC1Q96S66 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
CLCC1Q96S66 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms