Protein–RNA interactions for Protein: Q96RJ6

FERD3L, Fer3-like protein, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FERD3LQ96RJ6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FERD3LQ96RJ6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FERD3LQ96RJ6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 BICD1-207ENST00000551848 1962 ntBASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 MIR3652-201ENST00000579335 131 ntBASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
FERD3LQ96RJ6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 AC104819.1-201ENST00000504587 486 ntBASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 AC112698.1-201ENST00000510299 916 ntBASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 AC074051.2-201ENST00000565115 352 ntBASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 ABALON-201ENST00000629058 1903 ntBASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
FERD3LQ96RJ6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 AL845331.1-201ENST00000424978 1190 ntBASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 DUTP2-201ENST00000519164 463 ntBASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.49■□□□□ 0.39
FERD3LQ96RJ6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms