Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NEK1Q96PY6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NEK1Q96PY6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NEK1Q96PY6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NEK1Q96PY6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NEK1Q96PY6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NEK1Q96PY6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NEK1Q96PY6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.24■□□□□ 0.99
NEK1Q96PY6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.24■□□□□ 0.99
NEK1Q96PY6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.24■□□□□ 0.99
NEK1Q96PY6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
NEK1Q96PY6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NEK1Q96PY6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NEK1Q96PY6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NEK1Q96PY6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NEK1Q96PY6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NEK1Q96PY6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NEK1Q96PY6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.24■□□□□ 0.99
NEK1Q96PY6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
NEK1Q96PY6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.24■□□□□ 0.99
NEK1Q96PY6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NEK1Q96PY6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NEK1Q96PY6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
NEK1Q96PY6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NEK1Q96PY6 AL031133.1-201ENST00000406807 723 ntBASIC21.23■□□□□ 0.99
NEK1Q96PY6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
NEK1Q96PY6 AL645929.1-201ENST00000420084 975 ntBASIC21.23■□□□□ 0.99
NEK1Q96PY6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.23■□□□□ 0.99
NEK1Q96PY6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.23■□□□□ 0.99
NEK1Q96PY6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.23■□□□□ 0.99
NEK1Q96PY6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.23■□□□□ 0.99
NEK1Q96PY6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NEK1Q96PY6 AC112698.1-201ENST00000510299 916 ntBASIC21.23■□□□□ 0.99
NEK1Q96PY6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.23■□□□□ 0.99
NEK1Q96PY6 AL136038.3-201ENST00000561909 1096 ntBASIC21.23■□□□□ 0.99
NEK1Q96PY6 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.23■□□□□ 0.99
NEK1Q96PY6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.23■□□□□ 0.99
NEK1Q96PY6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.23■□□□□ 0.99
NEK1Q96PY6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.23■□□□□ 0.99
NEK1Q96PY6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NEK1Q96PY6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NEK1Q96PY6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
NEK1Q96PY6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.23■□□□□ 0.99
NEK1Q96PY6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.23■□□□□ 0.99
NEK1Q96PY6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NEK1Q96PY6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
NEK1Q96PY6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
NEK1Q96PY6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NEK1Q96PY6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NEK1Q96PY6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NEK1Q96PY6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NEK1Q96PY6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.23■□□□□ 0.99
NEK1Q96PY6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NEK1Q96PY6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
NEK1Q96PY6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NEK1Q96PY6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NEK1Q96PY6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
NEK1Q96PY6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.22■□□□□ 0.99
NEK1Q96PY6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NEK1Q96PY6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
NEK1Q96PY6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NEK1Q96PY6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NEK1Q96PY6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NEK1Q96PY6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.22■□□□□ 0.99
NEK1Q96PY6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.22■□□□□ 0.99
NEK1Q96PY6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.22■□□□□ 0.99
NEK1Q96PY6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.22■□□□□ 0.99
NEK1Q96PY6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.22■□□□□ 0.99
NEK1Q96PY6 AC068472.1-201ENST00000474589 881 ntBASIC21.22■□□□□ 0.99
NEK1Q96PY6 NTF6B-201ENST00000591913 560 ntBASIC21.22■□□□□ 0.99
NEK1Q96PY6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NEK1Q96PY6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.22■□□□□ 0.99
NEK1Q96PY6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NEK1Q96PY6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NEK1Q96PY6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.22■□□□□ 0.99
NEK1Q96PY6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.22■□□□□ 0.99
NEK1Q96PY6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.22■□□□□ 0.99
NEK1Q96PY6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NEK1Q96PY6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
NEK1Q96PY6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NEK1Q96PY6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
NEK1Q96PY6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NEK1Q96PY6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NEK1Q96PY6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEK1Q96PY6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEK1Q96PY6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEK1Q96PY6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEK1Q96PY6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NEK1Q96PY6 AC009949.1-201ENST00000623048 1830 ntBASIC21.21■□□□□ 0.99
NEK1Q96PY6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEK1Q96PY6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.21■□□□□ 0.99
NEK1Q96PY6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.21■□□□□ 0.99
NEK1Q96PY6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEK1Q96PY6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEK1Q96PY6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEK1Q96PY6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NEK1Q96PY6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.21■□□□□ 0.99
NEK1Q96PY6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.21■□□□□ 0.99
NEK1Q96PY6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.21■□□□□ 0.99
NEK1Q96PY6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms