Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.26□□□□□ -0.29
ODF3Q96PU9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ODF3Q96PU9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 FAM8A6P-201ENST00000407496 1135 ntBASIC13.26□□□□□ -0.29
ODF3Q96PU9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
ODF3Q96PU9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.26□□□□□ -0.29
ODF3Q96PU9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.26□□□□□ -0.29
ODF3Q96PU9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.26□□□□□ -0.29
ODF3Q96PU9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
ODF3Q96PU9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.26□□□□□ -0.29
ODF3Q96PU9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.26□□□□□ -0.29
ODF3Q96PU9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ODF3Q96PU9 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.26□□□□□ -0.29
ODF3Q96PU9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ODF3Q96PU9 AL391807.1-203ENST00000604392 2365 ntBASIC13.25□□□□□ -0.29
ODF3Q96PU9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.25□□□□□ -0.29
ODF3Q96PU9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ODF3Q96PU9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ODF3Q96PU9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.25□□□□□ -0.29
ODF3Q96PU9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
ODF3Q96PU9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.25□□□□□ -0.29
ODF3Q96PU9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.25□□□□□ -0.29
ODF3Q96PU9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ODF3Q96PU9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ODF3Q96PU9 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.25□□□□□ -0.29
ODF3Q96PU9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ODF3Q96PU9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ODF3Q96PU9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ODF3Q96PU9 STARP1-201ENST00000397973 869 ntBASIC13.25□□□□□ -0.29
ODF3Q96PU9 KRT18P48-201ENST00000434763 852 ntBASIC13.25□□□□□ -0.29
ODF3Q96PU9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.25□□□□□ -0.29
ODF3Q96PU9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ODF3Q96PU9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.25□□□□□ -0.29
ODF3Q96PU9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ODF3Q96PU9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ODF3Q96PU9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ODF3Q96PU9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ODF3Q96PU9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ODF3Q96PU9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ODF3Q96PU9 AC099398.1-201ENST00000567919 2776 ntBASIC13.25□□□□□ -0.29
ODF3Q96PU9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.25□□□□□ -0.29
ODF3Q96PU9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ODF3Q96PU9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
ODF3Q96PU9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.25□□□□□ -0.29
ODF3Q96PU9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ODF3Q96PU9 HLA-J-201ENST00000462773 1622 ntBASIC13.24□□□□□ -0.29
ODF3Q96PU9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ODF3Q96PU9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ODF3Q96PU9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ODF3Q96PU9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ODF3Q96PU9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ODF3Q96PU9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ODF3Q96PU9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ODF3Q96PU9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 AC100803.2-201ENST00000562459 1963 ntBASIC13.24□□□□□ -0.29
ODF3Q96PU9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ODF3Q96PU9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 HLA-F-220ENST00000434407 884 ntBASIC13.24□□□□□ -0.29
ODF3Q96PU9 BX664615.1-201ENST00000443558 458 ntBASIC13.24□□□□□ -0.29
ODF3Q96PU9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 AL023973.1-201ENST00000624619 620 ntBASIC13.24□□□□□ -0.29
ODF3Q96PU9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ODF3Q96PU9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ODF3Q96PU9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ODF3Q96PU9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.24□□□□□ -0.29
ODF3Q96PU9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ODF3Q96PU9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ODF3Q96PU9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
ODF3Q96PU9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
ODF3Q96PU9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.23□□□□□ -0.29
ODF3Q96PU9 LINC00304-203ENST00000565008 1864 ntBASIC13.23□□□□□ -0.29
ODF3Q96PU9 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms