Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.48■□□□□ 0.55
RPRD1AQ96P16 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPRD1AQ96P16 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.48■□□□□ 0.55
RPRD1AQ96P16 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.48■□□□□ 0.55
RPRD1AQ96P16 AC012313.10-201ENST00000623509 926 ntBASIC18.48■□□□□ 0.55
RPRD1AQ96P16 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPRD1AQ96P16 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.48■□□□□ 0.55
RPRD1AQ96P16 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPRD1AQ96P16 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPRD1AQ96P16 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.48■□□□□ 0.55
RPRD1AQ96P16 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RPRD1AQ96P16 NSUN5P1-202ENST00000421140 1535 ntBASIC18.48■□□□□ 0.55
RPRD1AQ96P16 NSUN5P2-203ENST00000457352 1529 ntBASIC18.48■□□□□ 0.55
RPRD1AQ96P16 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPRD1AQ96P16 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPRD1AQ96P16 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPRD1AQ96P16 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPRD1AQ96P16 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
RPRD1AQ96P16 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 IGHV3-47-201ENST00000425060 335 ntBASIC18.47■□□□□ 0.55
RPRD1AQ96P16 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 AC099336.1-202ENST00000602961 463 ntBASIC18.47■□□□□ 0.55
RPRD1AQ96P16 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPRD1AQ96P16 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 AL354751.1-201ENST00000412768 1863 ntBASIC18.46■□□□□ 0.55
RPRD1AQ96P16 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 AC005336.2-201ENST00000593183 939 ntBASIC18.46■□□□□ 0.55
RPRD1AQ96P16 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPRD1AQ96P16 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RPRD1AQ96P16 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RPRD1AQ96P16 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 FLJ13224-201ENST00000313737 1514 ntBASIC18.45■□□□□ 0.54
RPRD1AQ96P16 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms