Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 AL020989.1-201ENST00000422979 469 ntBASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 AC073592.5-201ENST00000624854 528 ntBASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 AC092865.6-201ENST00000642101 219 ntBASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 ELL2P1-201ENST00000413990 1906 ntBASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 AC004817.3-201ENST00000602957 2129 ntBASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN4Q96NY8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 PCDHAC2-203ENST00000615316 3011 ntBASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 AC011467.4-201ENST00000594891 528 ntBASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 AL513190.1-201ENST00000621254 727 ntBASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NECTIN4Q96NY8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 ELK2BP-201ENST00000415014 1224 ntBASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 HCG4B-203ENST00000450128 991 ntBASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 AC108073.2-201ENST00000464002 357 ntBASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN4Q96NY8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NECTIN4Q96NY8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN4Q96NY8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN4Q96NY8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN4Q96NY8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN4Q96NY8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN4Q96NY8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN4Q96NY8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN4Q96NY8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN4Q96NY8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN4Q96NY8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.47■□□□□ 0.55
NECTIN4Q96NY8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
NECTIN4Q96NY8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN4Q96NY8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN4Q96NY8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN4Q96NY8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.47■□□□□ 0.55
NECTIN4Q96NY8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.47■□□□□ 0.55
NECTIN4Q96NY8 CEND1P1-201ENST00000451006 455 ntBASIC18.47■□□□□ 0.55
NECTIN4Q96NY8 IGHV3-65-201ENST00000523210 341 ntBASIC18.47■□□□□ 0.55
NECTIN4Q96NY8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms