Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00479Q96M42 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
LINC00479Q96M42 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00479Q96M42 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC00479Q96M42 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 FAM207BP-201ENST00000447172 505 ntBASIC13.72□□□□□ -0.21
LINC00479Q96M42 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.72□□□□□ -0.21
LINC00479Q96M42 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
LINC00479Q96M42 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00479Q96M42 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00479Q96M42 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.72□□□□□ -0.21
LINC00479Q96M42 AC130371.2-201ENST00000619443 611 ntBASIC13.72□□□□□ -0.21
LINC00479Q96M42 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00479Q96M42 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
LINC00479Q96M42 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
LINC00479Q96M42 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
LINC00479Q96M42 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00479Q96M42 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00479Q96M42 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00479Q96M42 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00479Q96M42 PCDHA14-201ENST00000506751 2298 ntBASIC13.71□□□□□ -0.21
LINC00479Q96M42 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00479Q96M42 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00479Q96M42 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC00479Q96M42 AC008741.2-201ENST00000612792 3115 ntBASIC13.71□□□□□ -0.21
LINC00479Q96M42 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
LINC00479Q96M42 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LINC00479Q96M42 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00479Q96M42 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00479Q96M42 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00479Q96M42 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00479Q96M42 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00479Q96M42 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00479Q96M42 AP002982.1-201ENST00000492365 877 ntBASIC13.71□□□□□ -0.21
LINC00479Q96M42 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.71□□□□□ -0.21
LINC00479Q96M42 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.71□□□□□ -0.21
LINC00479Q96M42 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00479Q96M42 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00479Q96M42 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00479Q96M42 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00479Q96M42 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00479Q96M42 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00479Q96M42 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC00479Q96M42 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.71□□□□□ -0.22
LINC00479Q96M42 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00479Q96M42 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00479Q96M42 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00479Q96M42 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00479Q96M42 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
LINC00479Q96M42 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00479Q96M42 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms