Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.11■□□□□ 0.33
ITCHQ96J02 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.11■□□□□ 0.33
ITCHQ96J02 AC010653.2-201ENST00000623505 997 ntBASIC17.11■□□□□ 0.33
ITCHQ96J02 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.11■□□□□ 0.33
ITCHQ96J02 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.11■□□□□ 0.33
ITCHQ96J02 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ITCHQ96J02 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.11■□□□□ 0.33
ITCHQ96J02 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.11■□□□□ 0.33
ITCHQ96J02 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
ITCHQ96J02 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.11■□□□□ 0.33
ITCHQ96J02 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 AL355312.1-201ENST00000407115 2176 ntBASIC17.11■□□□□ 0.33
ITCHQ96J02 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ITCHQ96J02 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
ITCHQ96J02 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ITCHQ96J02 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
ITCHQ96J02 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.1■□□□□ 0.33
ITCHQ96J02 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.1■□□□□ 0.33
ITCHQ96J02 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.1■□□□□ 0.33
ITCHQ96J02 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.1■□□□□ 0.33
ITCHQ96J02 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.1■□□□□ 0.33
ITCHQ96J02 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ITCHQ96J02 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ITCHQ96J02 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.1■□□□□ 0.33
ITCHQ96J02 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.1■□□□□ 0.33
ITCHQ96J02 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ITCHQ96J02 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 AC132938.6-201ENST00000623828 1655 ntBASIC17.1■□□□□ 0.33
ITCHQ96J02 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.1■□□□□ 0.33
ITCHQ96J02 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITCHQ96J02 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ITCHQ96J02 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.1■□□□□ 0.33
ITCHQ96J02 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ITCHQ96J02 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.09■□□□□ 0.33
ITCHQ96J02 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
ITCHQ96J02 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ITCHQ96J02 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ITCHQ96J02 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.09■□□□□ 0.33
ITCHQ96J02 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.09■□□□□ 0.33
ITCHQ96J02 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ITCHQ96J02 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.09■□□□□ 0.33
ITCHQ96J02 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.09■□□□□ 0.33
ITCHQ96J02 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.09■□□□□ 0.33
ITCHQ96J02 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.09■□□□□ 0.33
ITCHQ96J02 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.09■□□□□ 0.33
ITCHQ96J02 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
ITCHQ96J02 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.09■□□□□ 0.33
ITCHQ96J02 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
ITCHQ96J02 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.09■□□□□ 0.33
ITCHQ96J02 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms