Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 AC116407.2-201ENST00000613639 860 ntBASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCD1Q96GM5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCD1Q96GM5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCD1Q96GM5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCD1Q96GM5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCD1Q96GM5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 AC007967.3-201ENST00000434308 558 ntBASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 MIR5100-201ENST00000579544 119 ntBASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 AL591684.3-201ENST00000605187 298 ntBASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.83■□□□□ 0.6
SMARCD1Q96GM5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 TPM4P1-201ENST00000436100 807 ntBASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 RN7SL510P-201ENST00000581311 263 ntBASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 INTS4P1-201ENST00000438455 1935 ntBASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCD1Q96GM5 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCD1Q96GM5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCD1Q96GM5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCD1Q96GM5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCD1Q96GM5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCD1Q96GM5 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCD1Q96GM5 KRT18P55-202ENST00000578578 1546 ntBASIC18.81■□□□□ 0.6
SMARCD1Q96GM5 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.81■□□□□ 0.6
SMARCD1Q96GM5 AC004870.1-201ENST00000315132 882 ntBASIC18.81■□□□□ 0.6
SMARCD1Q96GM5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCD1Q96GM5 FAM220CP-201ENST00000395253 831 ntBASIC18.81■□□□□ 0.6
SMARCD1Q96GM5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCD1Q96GM5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.81■□□□□ 0.6
SMARCD1Q96GM5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms