Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF183Q96D59 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF183Q96D59 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF183Q96D59 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RNF183Q96D59 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNF183Q96D59 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF183Q96D59 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF183Q96D59 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF183Q96D59 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF183Q96D59 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF183Q96D59 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF183Q96D59 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF183Q96D59 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF183Q96D59 IGHGP-201ENST00000390555 1178 ntBASIC13.32□□□□□ -0.28
RNF183Q96D59 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF183Q96D59 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.32□□□□□ -0.28
RNF183Q96D59 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.32□□□□□ -0.28
RNF183Q96D59 AP002383.4-201ENST00000442518 975 ntBASIC13.32□□□□□ -0.28
RNF183Q96D59 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.32□□□□□ -0.28
RNF183Q96D59 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.32□□□□□ -0.28
RNF183Q96D59 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.32□□□□□ -0.28
RNF183Q96D59 MIR3180-1-201ENST00000580374 94 ntBASIC13.32□□□□□ -0.28
RNF183Q96D59 MIR3180-3-201ENST00000584616 94 ntBASIC13.32□□□□□ -0.28
RNF183Q96D59 AP002414.4-201ENST00000589764 1148 ntBASIC13.32□□□□□ -0.28
RNF183Q96D59 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.32□□□□□ -0.28
RNF183Q96D59 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF183Q96D59 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RNF183Q96D59 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF183Q96D59 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.32□□□□□ -0.28
RNF183Q96D59 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RNF183Q96D59 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RNF183Q96D59 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF183Q96D59 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.32□□□□□ -0.28
RNF183Q96D59 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF183Q96D59 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RNF183Q96D59 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.31□□□□□ -0.28
RNF183Q96D59 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.31□□□□□ -0.28
RNF183Q96D59 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 AC009053.2-201ENST00000563701 2365 ntBASIC13.31□□□□□ -0.28
RNF183Q96D59 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
RNF183Q96D59 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.31□□□□□ -0.28
RNF183Q96D59 AC009102.3-201ENST00000623118 1491 ntBASIC13.31□□□□□ -0.28
RNF183Q96D59 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.31□□□□□ -0.28
RNF183Q96D59 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RNF183Q96D59 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.31□□□□□ -0.28
RNF183Q96D59 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.31□□□□□ -0.28
RNF183Q96D59 DUSP5P1-201ENST00000441325 1139 ntBASIC13.31□□□□□ -0.28
RNF183Q96D59 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.31□□□□□ -0.28
RNF183Q96D59 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
RNF183Q96D59 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.31□□□□□ -0.28
RNF183Q96D59 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.31□□□□□ -0.28
RNF183Q96D59 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.31□□□□□ -0.28
RNF183Q96D59 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 MYLKP1-201ENST00000509077 1580 ntBASIC13.31□□□□□ -0.28
RNF183Q96D59 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.31□□□□□ -0.28
RNF183Q96D59 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RNF183Q96D59 NOC2LP2-201ENST00000407594 1944 ntBASIC13.31□□□□□ -0.28
RNF183Q96D59 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.31□□□□□ -0.28
RNF183Q96D59 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF183Q96D59 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
RNF183Q96D59 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF183Q96D59 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.3□□□□□ -0.28
RNF183Q96D59 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
RNF183Q96D59 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.3□□□□□ -0.28
RNF183Q96D59 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF183Q96D59 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF183Q96D59 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RNF183Q96D59 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF183Q96D59 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RNF183Q96D59 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNF183Q96D59 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF183Q96D59 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF183Q96D59 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF183Q96D59 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF183Q96D59 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF183Q96D59 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
RNF183Q96D59 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF183Q96D59 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms