Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 MIR3180-1-201ENST00000580374 94 ntBASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 MIR3180-3-201ENST00000584616 94 ntBASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 AL138831.2-201ENST00000606564 490 ntBASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 AP002414.4-201ENST00000589764 1148 ntBASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 KRT18P1-202ENST00000452408 1331 ntBASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTHRC1Q96CG8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 UPK3BP1-201ENST00000428678 509 ntBASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 AC091607.1-201ENST00000490318 1060 ntBASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 AP005901.3-202ENST00000581653 237 ntBASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 AC233702.3-201ENST00000578656 1387 ntBASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTHRC1Q96CG8 REXO1L11P-201ENST00000620964 1927 ntBASIC16.58■□□□□ 0.25
CTHRC1Q96CG8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CTHRC1Q96CG8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CTHRC1Q96CG8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.58■□□□□ 0.25
CTHRC1Q96CG8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CTHRC1Q96CG8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CTHRC1Q96CG8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 BX276092.7-203ENST00000637198 1536 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms