Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 AL353593.2-201ENST00000602529 1483 ntBASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 MRPL20P1-201ENST00000400819 433 ntBASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 HLA-J-202ENST00000469281 1241 ntBASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 OR7E47P-204ENST00000575924 449 ntBASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 AC105339.1-204ENST00000636249 355 ntBASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 AC092902.6-201ENST00000641783 218 ntBASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM43Q96BQ3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 COX5BP2-201ENST00000392354 334 ntBASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM43Q96BQ3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 AL805961.1-202ENST00000641562 540 ntBASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 AL049757.1-201ENST00000616842 1596 ntBASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM43Q96BQ3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TRIM43Q96BQ3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM43Q96BQ3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM43Q96BQ3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.34■□□□□ 0.69
TRIM43Q96BQ3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM43Q96BQ3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM43Q96BQ3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM43Q96BQ3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM43Q96BQ3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM43Q96BQ3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.34■□□□□ 0.69
TRIM43Q96BQ3 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.34■□□□□ 0.69
TRIM43Q96BQ3 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.34■□□□□ 0.69
TRIM43Q96BQ3 AC025678.2-201ENST00000562061 970 ntBASIC19.34■□□□□ 0.69
TRIM43Q96BQ3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms