Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH3KBP1Q96B97 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.79■□□□□ 0.44
SH3KBP1Q96B97 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH3KBP1Q96B97 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SH3KBP1Q96B97 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH3KBP1Q96B97 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 DUSP5P1-201ENST00000441325 1139 ntBASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 PRELID1P1-202ENST00000567272 903 ntBASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 AL691432.3-201ENST00000621860 400 ntBASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH3KBP1Q96B97 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.77■□□□□ 0.44
SH3KBP1Q96B97 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SH3KBP1Q96B97 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SH3KBP1Q96B97 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SH3KBP1Q96B97 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SH3KBP1Q96B97 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
SH3KBP1Q96B97 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SH3KBP1Q96B97 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.77■□□□□ 0.43
SH3KBP1Q96B97 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.77■□□□□ 0.43
SH3KBP1Q96B97 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SH3KBP1Q96B97 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 NUS1P1-201ENST00000446295 882 ntBASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms