Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.26■□□□□ 0.35
VPS33AQ96AX1 AL023803.3-201ENST00000615559 522 ntBASIC17.26■□□□□ 0.35
VPS33AQ96AX1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 AD000864.1-201ENST00000624076 2295 ntBASIC17.26■□□□□ 0.35
VPS33AQ96AX1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 TNRC18P3-201ENST00000441896 2691 ntBASIC17.25■□□□□ 0.35
VPS33AQ96AX1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 AL023806.1-201ENST00000603994 1649 ntBASIC17.25■□□□□ 0.35
VPS33AQ96AX1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 AP001094.4-201ENST00000579008 2176 ntBASIC17.25■□□□□ 0.35
VPS33AQ96AX1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 AC084018.2-201ENST00000613093 2607 ntBASIC17.25■□□□□ 0.35
VPS33AQ96AX1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
VPS33AQ96AX1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 AC132938.6-201ENST00000623828 1655 ntBASIC17.24■□□□□ 0.35
VPS33AQ96AX1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 AL355355.2-201ENST00000442321 338 ntBASIC17.24■□□□□ 0.35
VPS33AQ96AX1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 AC142381.4-202ENST00000563973 229 ntBASIC17.24■□□□□ 0.35
VPS33AQ96AX1 WWOX-216ENST00000569818 525 ntBASIC17.24■□□□□ 0.35
VPS33AQ96AX1 AL049637.2-201ENST00000641778 930 ntBASIC17.24■□□□□ 0.35
VPS33AQ96AX1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms