Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 KRT18P55-202ENST00000578578 1546 ntBASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 MIR1224-201ENST00000408193 85 ntBASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 LIN28AP1-201ENST00000429574 405 ntBASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
RAB40AQ8WXH6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 TSPY17P-201ENST00000450329 467 ntBASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 CA15P1-201ENST00000481698 905 ntBASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 RN7SL850P-201ENST00000579959 291 ntBASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40AQ8WXH6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 AC106820.2-201ENST00000563775 3264 ntBASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 AP001094.4-201ENST00000579008 2176 ntBASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 TERF1P1-201ENST00000311003 1181 ntBASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 ATP5G1P1-201ENST00000448724 379 ntBASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RAB40AQ8WXH6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms