Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 LINC00167-201ENST00000530583 1419 ntBASIC18.18■□□□□ 0.5
PTCD2Q8WV60 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCD2Q8WV60 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 MIR662-201ENST00000384847 95 ntBASIC18.16■□□□□ 0.5
PTCD2Q8WV60 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCD2Q8WV60 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PTCD2Q8WV60 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.15■□□□□ 0.5
PTCD2Q8WV60 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTCD2Q8WV60 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
PTCD2Q8WV60 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTCD2Q8WV60 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTCD2Q8WV60 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.15■□□□□ 0.5
PTCD2Q8WV60 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.15■□□□□ 0.5
PTCD2Q8WV60 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTCD2Q8WV60 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTCD2Q8WV60 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTCD2Q8WV60 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTCD2Q8WV60 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms