Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
TRIM41Q8WV44 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
TRIM41Q8WV44 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
TRIM41Q8WV44 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC30.59■■■□□ 2.49
TRIM41Q8WV44 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
TRIM41Q8WV44 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
TRIM41Q8WV44 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
TRIM41Q8WV44 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
TRIM41Q8WV44 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
TRIM41Q8WV44 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
TRIM41Q8WV44 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC30.59■■■□□ 2.49
TRIM41Q8WV44 SIGLEC30P-201ENST00000455569 941 ntBASIC30.59■■■□□ 2.49
TRIM41Q8WV44 RNA5SP415-201ENST00000517246 115 ntBASIC30.59■■■□□ 2.49
TRIM41Q8WV44 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC30.59■■■□□ 2.49
TRIM41Q8WV44 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC30.59■■■□□ 2.49
TRIM41Q8WV44 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC30.59■■■□□ 2.49
TRIM41Q8WV44 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC30.59■■■□□ 2.49
TRIM41Q8WV44 AL359881.2-201ENST00000602973 570 ntBASIC30.59■■■□□ 2.49
TRIM41Q8WV44 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC30.59■■■□□ 2.49
TRIM41Q8WV44 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 ATP6V0CP3-201ENST00000417255 467 ntBASIC30.58■■■□□ 2.49
TRIM41Q8WV44 AC092910.1-201ENST00000482027 1129 ntBASIC30.58■■■□□ 2.49
TRIM41Q8WV44 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 AC005829.1-201ENST00000570002 483 ntBASIC30.58■■■□□ 2.49
TRIM41Q8WV44 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 STX6-204ENST00000542060 4809 ntTSL 2 BASIC30.58■■■□□ 2.49
TRIM41Q8WV44 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TRIM41Q8WV44 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC30.57■■■□□ 2.48
TRIM41Q8WV44 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
TRIM41Q8WV44 PHGDH-209ENST00000641074 1780 ntBASIC30.57■■■□□ 2.48
TRIM41Q8WV44 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC30.57■■■□□ 2.48
TRIM41Q8WV44 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TRIM41Q8WV44 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TRIM41Q8WV44 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC30.57■■■□□ 2.48
TRIM41Q8WV44 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
TRIM41Q8WV44 PARP8-218ENST00000513738 596 ntTSL 4 BASIC30.57■■■□□ 2.48
TRIM41Q8WV44 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC30.57■■■□□ 2.48
TRIM41Q8WV44 MIR4469-201ENST00000583919 79 ntBASIC30.57■■■□□ 2.48
TRIM41Q8WV44 INO80C-206ENST00000586489 594 ntTSL 3 BASIC30.57■■■□□ 2.48
TRIM41Q8WV44 AC093028.1-201ENST00000622998 982 ntBASIC30.57■■■□□ 2.48
TRIM41Q8WV44 AC132938.6-201ENST00000623828 1655 ntBASIC30.57■■■□□ 2.48
TRIM41Q8WV44 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TRIM41Q8WV44 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TRIM41Q8WV44 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TRIM41Q8WV44 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TRIM41Q8WV44 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 SLC25A6P5-201ENST00000435663 894 ntBASIC30.56■■■□□ 2.48
TRIM41Q8WV44 GALT-202ENST00000450095 1280 ntTSL 2 BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 ANKRD20A8P-203ENST00000641373 517 ntBASIC30.56■■■□□ 2.48
TRIM41Q8WV44 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC30.56■■■□□ 2.48
TRIM41Q8WV44 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
TRIM41Q8WV44 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC30.55■■■□□ 2.48
TRIM41Q8WV44 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
TRIM41Q8WV44 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
TRIM41Q8WV44 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
TRIM41Q8WV44 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
TRIM41Q8WV44 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC30.55■■■□□ 2.48
TRIM41Q8WV44 AC011840.4-201ENST00000578471 627 ntBASIC30.55■■■□□ 2.48
TRIM41Q8WV44 AC009154.2-201ENST00000621177 724 ntBASIC30.55■■■□□ 2.48
TRIM41Q8WV44 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
TRIM41Q8WV44 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
TRIM41Q8WV44 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms