Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRPM4Q8TD43 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRPM4Q8TD43 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRPM4Q8TD43 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRPM4Q8TD43 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRPM4Q8TD43 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRPM4Q8TD43 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC21.11■□□□□ 0.97
TRPM4Q8TD43 MRPL20P1-201ENST00000400819 433 ntBASIC21.11■□□□□ 0.97
TRPM4Q8TD43 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRPM4Q8TD43 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.11■□□□□ 0.97
TRPM4Q8TD43 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.11■□□□□ 0.97
TRPM4Q8TD43 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRPM4Q8TD43 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TRPM4Q8TD43 AC004449.1-201ENST00000564240 433 ntBASIC21.11■□□□□ 0.97
TRPM4Q8TD43 AC091812.2-201ENST00000619081 385 ntBASIC21.11■□□□□ 0.97
TRPM4Q8TD43 AL805961.1-202ENST00000641562 540 ntBASIC21.11■□□□□ 0.97
TRPM4Q8TD43 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.11■□□□□ 0.97
TRPM4Q8TD43 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TRPM4Q8TD43 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRPM4Q8TD43 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.11■□□□□ 0.97
TRPM4Q8TD43 AC025580.3-201ENST00000617932 1424 ntBASIC21.11■□□□□ 0.97
TRPM4Q8TD43 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 PNKD-204ENST00000436005 978 ntTSL 5 BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 RHOQP3-201ENST00000437982 621 ntBASIC21.1■□□□□ 0.97
TRPM4Q8TD43 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 AC005498.2-205ENST00000593218 784 ntBASIC21.1■□□□□ 0.97
TRPM4Q8TD43 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
TRPM4Q8TD43 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRPM4Q8TD43 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRPM4Q8TD43 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRPM4Q8TD43 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.09■□□□□ 0.97
TRPM4Q8TD43 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRPM4Q8TD43 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRPM4Q8TD43 ESPNP-201ENST00000270691 2015 ntBASIC21.09■□□□□ 0.97
TRPM4Q8TD43 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRPM4Q8TD43 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRPM4Q8TD43 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TRPM4Q8TD43 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRPM4Q8TD43 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.09■□□□□ 0.97
TRPM4Q8TD43 AC004461.1-201ENST00000412461 403 ntBASIC21.09■□□□□ 0.97
TRPM4Q8TD43 KLF4P1-201ENST00000412782 1185 ntBASIC21.09■□□□□ 0.97
TRPM4Q8TD43 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.09■□□□□ 0.97
TRPM4Q8TD43 GREM1-201ENST00000560677 623 ntTSL 4 BASIC21.09■□□□□ 0.97
TRPM4Q8TD43 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.09■□□□□ 0.97
TRPM4Q8TD43 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
TRPM4Q8TD43 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21.09■□□□□ 0.97
TRPM4Q8TD43 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.09■□□□□ 0.97
TRPM4Q8TD43 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.09■□□□□ 0.97
TRPM4Q8TD43 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TRPM4Q8TD43 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRPM4Q8TD43 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRPM4Q8TD43 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRPM4Q8TD43 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
TRPM4Q8TD43 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRPM4Q8TD43 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.08■□□□□ 0.97
TRPM4Q8TD43 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRPM4Q8TD43 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRPM4Q8TD43 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRPM4Q8TD43 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRPM4Q8TD43 ACTG1P14-201ENST00000446382 1122 ntBASIC21.08■□□□□ 0.97
TRPM4Q8TD43 PAWRP1-201ENST00000451083 565 ntBASIC21.08■□□□□ 0.97
TRPM4Q8TD43 AC074386.1-202ENST00000463561 864 ntBASIC21.08■□□□□ 0.97
TRPM4Q8TD43 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.08■□□□□ 0.97
TRPM4Q8TD43 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.08■□□□□ 0.97
TRPM4Q8TD43 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.08■□□□□ 0.97
TRPM4Q8TD43 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
TRPM4Q8TD43 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC21.08■□□□□ 0.97
TRPM4Q8TD43 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRPM4Q8TD43 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
TRPM4Q8TD43 AC004835.2-201ENST00000603762 682 ntBASIC21.08■□□□□ 0.97
TRPM4Q8TD43 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
TRPM4Q8TD43 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.08■□□□□ 0.97
TRPM4Q8TD43 AC092902.6-201ENST00000641783 218 ntBASIC21.08■□□□□ 0.97
TRPM4Q8TD43 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRPM4Q8TD43 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.08■□□□□ 0.96
TRPM4Q8TD43 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.07■□□□□ 0.96
TRPM4Q8TD43 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRPM4Q8TD43 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
TRPM4Q8TD43 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRPM4Q8TD43 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms