Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.67■□□□□ 0.42
RDH11Q8TC12 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RDH11Q8TC12 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RDH11Q8TC12 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.66■□□□□ 0.42
RDH11Q8TC12 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.66■□□□□ 0.42
RDH11Q8TC12 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.66■□□□□ 0.42
RDH11Q8TC12 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.66■□□□□ 0.42
RDH11Q8TC12 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 TSPY14P-201ENST00000303979 915 ntBASIC17.66■□□□□ 0.42
RDH11Q8TC12 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.66■□□□□ 0.42
RDH11Q8TC12 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.66■□□□□ 0.42
RDH11Q8TC12 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.66■□□□□ 0.42
RDH11Q8TC12 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RDH11Q8TC12 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.66■□□□□ 0.42
RDH11Q8TC12 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.66■□□□□ 0.42
RDH11Q8TC12 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.66■□□□□ 0.42
RDH11Q8TC12 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.66■□□□□ 0.42
RDH11Q8TC12 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
RDH11Q8TC12 AP000525.1-201ENST00000608286 694 ntBASIC17.66■□□□□ 0.42
RDH11Q8TC12 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.66■□□□□ 0.42
RDH11Q8TC12 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RDH11Q8TC12 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.66■□□□□ 0.42
RDH11Q8TC12 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RDH11Q8TC12 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
RDH11Q8TC12 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.66■□□□□ 0.42
RDH11Q8TC12 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RDH11Q8TC12 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RDH11Q8TC12 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RDH11Q8TC12 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.65■□□□□ 0.42
RDH11Q8TC12 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RDH11Q8TC12 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.65■□□□□ 0.42
RDH11Q8TC12 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.65■□□□□ 0.42
RDH11Q8TC12 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RDH11Q8TC12 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RDH11Q8TC12 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RDH11Q8TC12 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RDH11Q8TC12 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.65■□□□□ 0.42
RDH11Q8TC12 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RDH11Q8TC12 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RDH11Q8TC12 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.65■□□□□ 0.42
RDH11Q8TC12 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.65■□□□□ 0.42
RDH11Q8TC12 MIR4785-201ENST00000585005 73 ntBASIC17.65■□□□□ 0.42
RDH11Q8TC12 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RDH11Q8TC12 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RDH11Q8TC12 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RDH11Q8TC12 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RDH11Q8TC12 KRT17P2-201ENST00000300992 1314 ntBASIC17.65■□□□□ 0.42
RDH11Q8TC12 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RDH11Q8TC12 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RDH11Q8TC12 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.65■□□□□ 0.42
RDH11Q8TC12 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RDH11Q8TC12 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RDH11Q8TC12 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RDH11Q8TC12 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.64■□□□□ 0.41
RDH11Q8TC12 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.64■□□□□ 0.41
RDH11Q8TC12 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RDH11Q8TC12 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.64■□□□□ 0.41
RDH11Q8TC12 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RDH11Q8TC12 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.64■□□□□ 0.41
RDH11Q8TC12 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RDH11Q8TC12 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RDH11Q8TC12 DDX43P3-201ENST00000441064 443 ntBASIC17.64■□□□□ 0.41
RDH11Q8TC12 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.64■□□□□ 0.41
RDH11Q8TC12 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RDH11Q8TC12 AC113404.2-201ENST00000507884 177 ntBASIC17.64■□□□□ 0.41
RDH11Q8TC12 EGLN1P1-201ENST00000531623 762 ntBASIC17.64■□□□□ 0.41
RDH11Q8TC12 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.64■□□□□ 0.41
RDH11Q8TC12 MIR3917-201ENST00000580971 93 ntBASIC17.64■□□□□ 0.41
RDH11Q8TC12 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
RDH11Q8TC12 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.64■□□□□ 0.41
RDH11Q8TC12 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.64■□□□□ 0.41
RDH11Q8TC12 AC092865.7-201ENST00000641832 219 ntBASIC17.64■□□□□ 0.41
RDH11Q8TC12 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RDH11Q8TC12 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
RDH11Q8TC12 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RDH11Q8TC12 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RDH11Q8TC12 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.64■□□□□ 0.41
RDH11Q8TC12 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RDH11Q8TC12 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RDH11Q8TC12 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RDH11Q8TC12 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RDH11Q8TC12 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms