Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 C1QL1P1-201ENST00000568105 661 ntBASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 AL109659.2-201ENST00000606809 1674 ntBASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 HLA-J-201ENST00000462773 1622 ntBASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 AC099343.3-201ENST00000605834 2503 ntBASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 LINC01126-201ENST00000623515 1646 ntBASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 Z85996.1-201ENST00000494644 937 ntBASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 AC060834.1-201ENST00000443027 2032 ntBASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC197Q8NCU1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 SDHAP2-201ENST00000455183 2001 ntBASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 LINC00554-201ENST00000564841 3011 ntBASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 KRT8P50-201ENST00000562022 1438 ntBASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC197Q8NCU1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC197Q8NCU1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC197Q8NCU1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CCDC197Q8NCU1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC197Q8NCU1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC197Q8NCU1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms