Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 AL353801.3-201ENST00000609898 542 ntBASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 AP000997.3-201ENST00000623333 2250 ntBASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 HTR7P1-202ENST00000624664 4411 ntBASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 AC068472.1-201ENST00000474589 881 ntBASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 AC104819.1-201ENST00000504587 486 ntBASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 AC093010.1-201ENST00000473625 1624 ntBASIC18.31■□□□□ 0.52
PCDH20Q8N6Y1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 PHGDH-209ENST00000641074 1780 ntBASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 AL845331.1-201ENST00000424978 1190 ntBASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 DUSP5P1-201ENST00000441325 1139 ntBASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 NUS1P1-201ENST00000446295 882 ntBASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 PRELID1P1-202ENST00000567272 903 ntBASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms