Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 SIRPAP1-201ENST00000448467 1770 ntBASIC27.92■■■□□ 2.06
VPS8Q8N3P4 PAN3-AS1-201ENST00000563843 1351 ntBASIC27.92■■■□□ 2.06
VPS8Q8N3P4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
VPS8Q8N3P4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC27.91■■■□□ 2.06
VPS8Q8N3P4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC27.91■■■□□ 2.06
VPS8Q8N3P4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC27.91■■■□□ 2.06
VPS8Q8N3P4 AC079776.2-201ENST00000641154 1609 ntBASIC27.91■■■□□ 2.06
VPS8Q8N3P4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC27.91■■■□□ 2.06
VPS8Q8N3P4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC27.91■■■□□ 2.06
VPS8Q8N3P4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
VPS8Q8N3P4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
VPS8Q8N3P4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
VPS8Q8N3P4 SIGLEC16-201ENST00000599858 1437 ntBASIC27.91■■■□□ 2.06
VPS8Q8N3P4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC27.91■■■□□ 2.06
VPS8Q8N3P4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
VPS8Q8N3P4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
VPS8Q8N3P4 KRT18P67-201ENST00000432816 1264 ntBASIC27.91■■■□□ 2.06
VPS8Q8N3P4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
VPS8Q8N3P4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC27.91■■■□□ 2.06
VPS8Q8N3P4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
VPS8Q8N3P4 REXO1L11P-201ENST00000620964 1927 ntBASIC27.91■■■□□ 2.06
VPS8Q8N3P4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
VPS8Q8N3P4 PC-208ENST00000529047 1607 ntTSL 3 BASIC27.91■■■□□ 2.06
VPS8Q8N3P4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
VPS8Q8N3P4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC27.9■■■□□ 2.06
VPS8Q8N3P4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC27.9■■■□□ 2.06
VPS8Q8N3P4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
VPS8Q8N3P4 AL390961.4-201ENST00000623958 2535 ntBASIC27.9■■■□□ 2.06
VPS8Q8N3P4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
VPS8Q8N3P4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC27.9■■■□□ 2.06
VPS8Q8N3P4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC27.9■■■□□ 2.06
VPS8Q8N3P4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
VPS8Q8N3P4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
VPS8Q8N3P4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC27.9■■■□□ 2.06
VPS8Q8N3P4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC27.9■■■□□ 2.06
VPS8Q8N3P4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC27.9■■■□□ 2.06
VPS8Q8N3P4 NOC2LP1-202ENST00000452600 2235 ntBASIC27.9■■■□□ 2.06
VPS8Q8N3P4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
VPS8Q8N3P4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC27.9■■■□□ 2.06
VPS8Q8N3P4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC27.89■■■□□ 2.06
VPS8Q8N3P4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.06
VPS8Q8N3P4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
VPS8Q8N3P4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
VPS8Q8N3P4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC27.89■■■□□ 2.06
VPS8Q8N3P4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC27.89■■■□□ 2.06
VPS8Q8N3P4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
VPS8Q8N3P4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
VPS8Q8N3P4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC27.89■■■□□ 2.06
VPS8Q8N3P4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC27.89■■■□□ 2.06
VPS8Q8N3P4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC27.89■■■□□ 2.06
VPS8Q8N3P4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
VPS8Q8N3P4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
VPS8Q8N3P4 SPDYE21P-201ENST00000413323 827 ntBASIC27.89■■■□□ 2.06
VPS8Q8N3P4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC27.89■■■□□ 2.06
VPS8Q8N3P4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC27.89■■■□□ 2.06
VPS8Q8N3P4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC27.89■■■□□ 2.06
VPS8Q8N3P4 MTDHP3-201ENST00000594186 672 ntBASIC27.89■■■□□ 2.06
VPS8Q8N3P4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC27.89■■■□□ 2.06
VPS8Q8N3P4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC27.89■■■□□ 2.05
VPS8Q8N3P4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC27.89■■■□□ 2.05
VPS8Q8N3P4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
VPS8Q8N3P4 AC132938.5-201ENST00000624980 1813 ntBASIC27.89■■■□□ 2.05
VPS8Q8N3P4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
VPS8Q8N3P4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
VPS8Q8N3P4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
VPS8Q8N3P4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC27.88■■■□□ 2.05
VPS8Q8N3P4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC27.88■■■□□ 2.05
VPS8Q8N3P4 SLC25A6P5-201ENST00000435663 894 ntBASIC27.88■■■□□ 2.05
VPS8Q8N3P4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC27.88■■■□□ 2.05
VPS8Q8N3P4 AC002558.1-201ENST00000488906 803 ntBASIC27.88■■■□□ 2.05
VPS8Q8N3P4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC27.88■■■□□ 2.05
VPS8Q8N3P4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC27.88■■■□□ 2.05
VPS8Q8N3P4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC27.88■■■□□ 2.05
VPS8Q8N3P4 AC025062.2-201ENST00000605477 670 ntBASIC27.88■■■□□ 2.05
VPS8Q8N3P4 AC148477.8-201ENST00000624298 468 ntBASIC27.88■■■□□ 2.05
VPS8Q8N3P4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
VPS8Q8N3P4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
VPS8Q8N3P4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
VPS8Q8N3P4 AC148477.5-201ENST00000625164 1645 ntBASIC27.88■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms