Protein–RNA interactions for Protein: Q8IZU3

SYCP3, Synaptonemal complex protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3Q8IZU3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SYCP3Q8IZU3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
SYCP3Q8IZU3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SYCP3Q8IZU3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYCP3Q8IZU3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYCP3Q8IZU3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYCP3Q8IZU3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SYCP3Q8IZU3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYCP3Q8IZU3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.82■□□□□ 0.76
SYCP3Q8IZU3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.82■□□□□ 0.76
SYCP3Q8IZU3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SYCP3Q8IZU3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 AC022898.2-201ENST00000616822 1312 ntBASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 TSPY22P-201ENST00000427496 604 ntBASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 KRT18P65-201ENST00000439811 1286 ntBASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 DUTP2-201ENST00000519164 463 ntBASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SYCP3Q8IZU3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 PCED1CP-201ENST00000419887 785 ntBASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYCP3Q8IZU3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SYCP3Q8IZU3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms