Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC24.7■■□□□ 1.55
XRN1Q8IZH2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
XRN1Q8IZH2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
XRN1Q8IZH2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
XRN1Q8IZH2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC24.7■■□□□ 1.54
XRN1Q8IZH2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC24.7■■□□□ 1.54
XRN1Q8IZH2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
XRN1Q8IZH2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
XRN1Q8IZH2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC24.7■■□□□ 1.54
XRN1Q8IZH2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
XRN1Q8IZH2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
XRN1Q8IZH2 AC005332.7-201ENST00000614046 2005 ntBASIC24.7■■□□□ 1.54
XRN1Q8IZH2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
XRN1Q8IZH2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 AC018445.3-201ENST00000624177 1945 ntBASIC24.69■■□□□ 1.54
XRN1Q8IZH2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 PCDHAC2-203ENST00000615316 3011 ntBASIC24.69■■□□□ 1.54
XRN1Q8IZH2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
XRN1Q8IZH2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
XRN1Q8IZH2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
XRN1Q8IZH2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
XRN1Q8IZH2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
XRN1Q8IZH2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
XRN1Q8IZH2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
XRN1Q8IZH2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC24.68■■□□□ 1.54
XRN1Q8IZH2 PAWRP1-201ENST00000451083 565 ntBASIC24.68■■□□□ 1.54
XRN1Q8IZH2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC24.68■■□□□ 1.54
XRN1Q8IZH2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC24.68■■□□□ 1.54
XRN1Q8IZH2 STK25P1-201ENST00000585406 838 ntBASIC24.68■■□□□ 1.54
XRN1Q8IZH2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
XRN1Q8IZH2 PHGDH-209ENST00000641074 1780 ntBASIC24.68■■□□□ 1.54
XRN1Q8IZH2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
XRN1Q8IZH2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
XRN1Q8IZH2 AC009336.1-201ENST00000608941 1553 ntBASIC24.68■■□□□ 1.54
XRN1Q8IZH2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC24.68■■□□□ 1.54
XRN1Q8IZH2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC24.67■■□□□ 1.54
XRN1Q8IZH2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC24.67■■□□□ 1.54
XRN1Q8IZH2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
XRN1Q8IZH2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC24.67■■□□□ 1.54
XRN1Q8IZH2 SIGLEC30P-201ENST00000455569 941 ntBASIC24.67■■□□□ 1.54
XRN1Q8IZH2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC24.67■■□□□ 1.54
XRN1Q8IZH2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC24.67■■□□□ 1.54
XRN1Q8IZH2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC24.67■■□□□ 1.54
XRN1Q8IZH2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC24.67■■□□□ 1.54
XRN1Q8IZH2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC24.67■■□□□ 1.54
XRN1Q8IZH2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
XRN1Q8IZH2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC24.67■■□□□ 1.54
XRN1Q8IZH2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
XRN1Q8IZH2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
XRN1Q8IZH2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC24.67■■□□□ 1.54
XRN1Q8IZH2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
XRN1Q8IZH2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC24.66■■□□□ 1.54
XRN1Q8IZH2 HLA-J-203ENST00000494367 1087 ntBASIC24.66■■□□□ 1.54
XRN1Q8IZH2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC24.66■■□□□ 1.54
XRN1Q8IZH2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC24.66■■□□□ 1.54
XRN1Q8IZH2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC24.66■■□□□ 1.54
XRN1Q8IZH2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
XRN1Q8IZH2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
XRN1Q8IZH2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
XRN1Q8IZH2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
XRN1Q8IZH2 AFG3L1P-217ENST00000557444 2447 ntBASIC24.66■■□□□ 1.54
XRN1Q8IZH2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
XRN1Q8IZH2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
XRN1Q8IZH2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
XRN1Q8IZH2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
XRN1Q8IZH2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC24.66■■□□□ 1.54
XRN1Q8IZH2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC24.66■■□□□ 1.54
XRN1Q8IZH2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC24.66■■□□□ 1.54
XRN1Q8IZH2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
XRN1Q8IZH2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
XRN1Q8IZH2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
XRN1Q8IZH2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC24.65■■□□□ 1.54
XRN1Q8IZH2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC24.65■■□□□ 1.54
XRN1Q8IZH2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
XRN1Q8IZH2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
XRN1Q8IZH2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC24.65■■□□□ 1.54
XRN1Q8IZH2 DUTP2-201ENST00000519164 463 ntBASIC24.65■■□□□ 1.54
XRN1Q8IZH2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC24.65■■□□□ 1.54
XRN1Q8IZH2 AL390955.2-201ENST00000603032 514 ntBASIC24.65■■□□□ 1.54
XRN1Q8IZH2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
XRN1Q8IZH2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
XRN1Q8IZH2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC24.65■■□□□ 1.54
XRN1Q8IZH2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms