Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
ZNF546Q86UE3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 AL603756.1-201ENST00000606511 2163 ntBASIC14.92□□□□□ -0.02
ZNF546Q86UE3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.92□□□□□ -0.02
ZNF546Q86UE3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 BX276092.2-201ENST00000417668 665 ntBASIC14.92□□□□□ -0.02
ZNF546Q86UE3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 PCDHB17P-201ENST00000539533 2393 ntBASIC14.92□□□□□ -0.02
ZNF546Q86UE3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF546Q86UE3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms