Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.29■□□□□ 0.2
ATG4DQ86TL0 AC083849.1-201ENST00000615227 514 ntBASIC16.29■□□□□ 0.2
ATG4DQ86TL0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.29■□□□□ 0.2
ATG4DQ86TL0 AC009154.2-201ENST00000621177 724 ntBASIC16.29■□□□□ 0.2
ATG4DQ86TL0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.29■□□□□ 0.2
ATG4DQ86TL0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATG4DQ86TL0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.29■□□□□ 0.2
ATG4DQ86TL0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATG4DQ86TL0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATG4DQ86TL0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 PCED1CP-201ENST00000419887 785 ntBASIC16.28■□□□□ 0.2
ATG4DQ86TL0 TSPY12P-201ENST00000421279 868 ntBASIC16.28■□□□□ 0.2
ATG4DQ86TL0 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 SPDYE13P-201ENST00000445314 798 ntBASIC16.28■□□□□ 0.2
ATG4DQ86TL0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.28■□□□□ 0.2
ATG4DQ86TL0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATG4DQ86TL0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
ATG4DQ86TL0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.27■□□□□ 0.2
ATG4DQ86TL0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATG4DQ86TL0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
ATG4DQ86TL0 AC005332.1-201ENST00000577698 1310 ntBASIC16.27■□□□□ 0.2
ATG4DQ86TL0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
ATG4DQ86TL0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATG4DQ86TL0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.27■□□□□ 0.2
ATG4DQ86TL0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.27■□□□□ 0.2
ATG4DQ86TL0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATG4DQ86TL0 GPR32P1-201ENST00000601788 811 ntBASIC16.27■□□□□ 0.2
ATG4DQ86TL0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ATG4DQ86TL0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATG4DQ86TL0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ATG4DQ86TL0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATG4DQ86TL0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
ATG4DQ86TL0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.27■□□□□ 0.19
ATG4DQ86TL0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
ATG4DQ86TL0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.27■□□□□ 0.19
ATG4DQ86TL0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATG4DQ86TL0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ATG4DQ86TL0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 AL353692.3-201ENST00000407031 1396 ntBASIC16.26■□□□□ 0.19
ATG4DQ86TL0 KRT8P47-201ENST00000604727 1398 ntBASIC16.26■□□□□ 0.19
ATG4DQ86TL0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 AC091076.1-201ENST00000610741 619 ntBASIC16.26■□□□□ 0.19
ATG4DQ86TL0 AC116407.2-201ENST00000613639 860 ntBASIC16.26■□□□□ 0.19
ATG4DQ86TL0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 AL121956.5-201ENST00000625261 221 ntBASIC16.26■□□□□ 0.19
ATG4DQ86TL0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 BCL2-203ENST00000589955 5011 ntBASIC16.26■□□□□ 0.19
ATG4DQ86TL0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.26■□□□□ 0.19
ATG4DQ86TL0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATG4DQ86TL0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms