Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC00575Q6W349 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC00575Q6W349 AC105036.2-201ENST00000569468 176 ntBASIC11.39□□□□□ -0.59
LINC00575Q6W349 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00575Q6W349 HLA-B-256ENST00000639848 1089 ntBASIC11.39□□□□□ -0.59
LINC00575Q6W349 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00575Q6W349 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC00575Q6W349 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC00575Q6W349 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00575Q6W349 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC00575Q6W349 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00575Q6W349 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC00575Q6W349 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC11.39□□□□□ -0.59
LINC00575Q6W349 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00575Q6W349 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC00575Q6W349 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00575Q6W349 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00575Q6W349 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC00575Q6W349 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC00575Q6W349 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC00575Q6W349 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00575Q6W349 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
LINC00575Q6W349 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC00575Q6W349 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 KRT8P50-201ENST00000562022 1438 ntBASIC11.38□□□□□ -0.59
LINC00575Q6W349 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC11.38□□□□□ -0.59
LINC00575Q6W349 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC11.38□□□□□ -0.59
LINC00575Q6W349 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC00575Q6W349 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
LINC00575Q6W349 AF201337.1-201ENST00000520239 748 ntBASIC11.38□□□□□ -0.59
LINC00575Q6W349 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC11.38□□□□□ -0.59
LINC00575Q6W349 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC00575Q6W349 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC11.38□□□□□ -0.59
LINC00575Q6W349 AC004264.1-201ENST00000608354 794 ntBASIC11.38□□□□□ -0.59
LINC00575Q6W349 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC00575Q6W349 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
LINC00575Q6W349 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC00575Q6W349 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
LINC00575Q6W349 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC00575Q6W349 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
LINC00575Q6W349 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC11.38□□□□□ -0.59
LINC00575Q6W349 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC00575Q6W349 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
LINC00575Q6W349 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
LINC00575Q6W349 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00575Q6W349 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00575Q6W349 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00575Q6W349 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00575Q6W349 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00575Q6W349 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00575Q6W349 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00575Q6W349 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00575Q6W349 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
LINC00575Q6W349 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00575Q6W349 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00575Q6W349 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
LINC00575Q6W349 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
LINC00575Q6W349 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00575Q6W349 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00575Q6W349 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
LINC00575Q6W349 SDHAP2-201ENST00000455183 2001 ntBASIC11.37□□□□□ -0.59
LINC00575Q6W349 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
LINC00575Q6W349 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
LINC00575Q6W349 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00575Q6W349 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC11.37□□□□□ -0.59
LINC00575Q6W349 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00575Q6W349 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC11.37□□□□□ -0.59
LINC00575Q6W349 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC00575Q6W349 OR2A1-AS1-207ENST00000486094 819 ntBASIC11.37□□□□□ -0.59
LINC00575Q6W349 SLC29A4P2-201ENST00000504749 1089 ntBASIC11.37□□□□□ -0.59
LINC00575Q6W349 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC11.37□□□□□ -0.59
LINC00575Q6W349 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
LINC00575Q6W349 PRKY-204ENST00000533551 1019 ntBASIC11.37□□□□□ -0.59
LINC00575Q6W349 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms