Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 SPDYE15P-201ENST00000424157 909 ntBASIC14.73□□□□□ -0.05
TREML4Q6UXN2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 NUS1P1-201ENST00000446295 882 ntBASIC14.73□□□□□ -0.05
TREML4Q6UXN2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 LINC01711-201ENST00000598340 967 ntBASIC14.73□□□□□ -0.05
TREML4Q6UXN2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TREML4Q6UXN2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 AP000240.1-201ENST00000609910 452 ntBASIC14.72□□□□□ -0.05
TREML4Q6UXN2 AL031008.1-201ENST00000619963 541 ntBASIC14.72□□□□□ -0.05
TREML4Q6UXN2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TREML4Q6UXN2 AC139713.2-201ENST00000641328 2723 ntBASIC14.72□□□□□ -0.05
TREML4Q6UXN2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 HBZP1-201ENST00000354915 429 ntBASIC14.71□□□□□ -0.05
TREML4Q6UXN2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 SPDYE13P-201ENST00000445314 798 ntBASIC14.71□□□□□ -0.05
TREML4Q6UXN2 EMBP1-201ENST00000458200 901 ntBASIC14.71□□□□□ -0.05
TREML4Q6UXN2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 AL160237.2-201ENST00000556165 472 ntBASIC14.71□□□□□ -0.05
TREML4Q6UXN2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TREML4Q6UXN2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms