Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 AL355355.2-201ENST00000442321 338 ntBASIC15.68■□□□□ 0.1
C11orf88Q6PI97 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 AF186192.3-201ENST00000583427 947 ntBASIC15.68■□□□□ 0.1
C11orf88Q6PI97 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 AC073195.1-201ENST00000607241 877 ntBASIC15.68■□□□□ 0.1
C11orf88Q6PI97 AL353708.3-201ENST00000610272 989 ntBASIC15.68■□□□□ 0.1
C11orf88Q6PI97 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 HTR7P1-201ENST00000538670 1336 ntBASIC15.68■□□□□ 0.1
C11orf88Q6PI97 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 AL139384.1-201ENST00000612143 3047 ntBASIC15.68■□□□□ 0.1
C11orf88Q6PI97 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 AC211429.1-201ENST00000415277 523 ntBASIC15.67■□□□□ 0.1
C11orf88Q6PI97 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 AC026471.5-201ENST00000615068 467 ntBASIC15.67■□□□□ 0.1
C11orf88Q6PI97 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
C11orf88Q6PI97 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.66■□□□□ 0.1
C11orf88Q6PI97 FAM210CP-201ENST00000445714 574 ntBASIC15.66■□□□□ 0.1
C11orf88Q6PI97 AP002982.1-201ENST00000492365 877 ntBASIC15.66■□□□□ 0.1
C11orf88Q6PI97 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
C11orf88Q6PI97 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms