Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 AL645939.2-201ENST00000427340 991 ntBASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 SIGLEC30P-201ENST00000455569 941 ntBASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 GPR89P-201ENST00000407924 1495 ntBASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNKSR3Q6P9H4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 AC003669.1-201ENST00000334569 611 ntBASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 AP002472.1-201ENST00000577490 586 ntBASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNKSR3Q6P9H4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 CEND1P1-201ENST00000451006 455 ntBASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 AC010654.1-201ENST00000615722 808 ntBASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNKSR3Q6P9H4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 PHGDH-209ENST00000641074 1780 ntBASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNKSR3Q6P9H4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms