Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC39BQ5VTQ0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 HTR7P1-202ENST00000624664 4411 ntBASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.68■□□□□ 0.58
TTC39BQ5VTQ0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 AC099343.3-201ENST00000605834 2503 ntBASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 SLC25A6P5-201ENST00000435663 894 ntBASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 HCG4P8-203ENST00000443049 980 ntBASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 IGHV3-41-201ENST00000613121 348 ntBASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms