Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 HLA-F-220ENST00000434407 884 ntBASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 AL136038.4-201ENST00000603606 1261 ntBASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 AC108860.2-201ENST00000562760 2183 ntBASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
KHDC1Q4VXA5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 MIR149-201ENST00000384879 89 ntBASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 AC009102.3-201ENST00000623118 1491 ntBASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KHDC1Q4VXA5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 PVRIG2P-201ENST00000435460 978 ntBASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 ZNF444P1-201ENST00000559497 298 ntBASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.16■□□□□ 0.5
KHDC1Q4VXA5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms