Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 AC012313.1-201ENST00000593393 3059 ntBASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 AL645608.8-201ENST00000606034 2086 ntBASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 AL359075.1-203ENST00000462729 1002 ntBASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 LINC01023-201ENST00000606054 436 ntBASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 AK4P3-201ENST00000418260 669 ntBASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 AC008687.5-201ENST00000593746 558 ntBASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 HYMAI.1-201ENST00000620949 238 ntBASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 AC141586.5-201ENST00000624546 2050 ntBASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 KRT89P-201ENST00000620027 1478 ntBASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP13A4Q4VNC1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 RNF152P1-201ENST00000397754 604 ntBASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 AC009949.1-201ENST00000623048 1830 ntBASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP13A4Q4VNC1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 AC108860.2-201ENST00000562760 2183 ntBASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 HBZP1-201ENST00000354915 429 ntBASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 KRT18P48-201ENST00000434763 852 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms