Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3AQ05086 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
UBE3AQ05086 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3AQ05086 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
UBE3AQ05086 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3AQ05086 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.95■□□□□ 0.62
UBE3AQ05086 AC211486.1-202ENST00000416371 468 ntBASIC18.95■□□□□ 0.62
UBE3AQ05086 AC023274.1-201ENST00000418278 595 ntBASIC18.95■□□□□ 0.62
UBE3AQ05086 MCCD1P2-201ENST00000423228 335 ntBASIC18.95■□□□□ 0.62
UBE3AQ05086 DNAJB3-202ENST00000449667 1266 ntBASIC18.95■□□□□ 0.62
UBE3AQ05086 AC108751.1-201ENST00000490852 363 ntBASIC18.95■□□□□ 0.62
UBE3AQ05086 AC211476.1-201ENST00000503899 468 ntBASIC18.95■□□□□ 0.62
UBE3AQ05086 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.95■□□□□ 0.62
UBE3AQ05086 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.95■□□□□ 0.62
UBE3AQ05086 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.95■□□□□ 0.62
UBE3AQ05086 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.95■□□□□ 0.62
UBE3AQ05086 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.95■□□□□ 0.62
UBE3AQ05086 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.95■□□□□ 0.62
UBE3AQ05086 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.95■□□□□ 0.62
UBE3AQ05086 AL589182.2-201ENST00000619332 1049 ntBASIC18.95■□□□□ 0.62
UBE3AQ05086 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.95■□□□□ 0.62
UBE3AQ05086 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3AQ05086 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3AQ05086 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3AQ05086 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.95■□□□□ 0.62
UBE3AQ05086 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3AQ05086 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE3AQ05086 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3AQ05086 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE3AQ05086 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
UBE3AQ05086 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3AQ05086 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3AQ05086 SPDYE21P-201ENST00000413323 827 ntBASIC18.94■□□□□ 0.62
UBE3AQ05086 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.94■□□□□ 0.62
UBE3AQ05086 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE3AQ05086 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE3AQ05086 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
UBE3AQ05086 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
UBE3AQ05086 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3AQ05086 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3AQ05086 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.94■□□□□ 0.62
UBE3AQ05086 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3AQ05086 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE3AQ05086 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3AQ05086 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
UBE3AQ05086 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
UBE3AQ05086 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.94■□□□□ 0.62
UBE3AQ05086 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE3AQ05086 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE3AQ05086 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE3AQ05086 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3AQ05086 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3AQ05086 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3AQ05086 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3AQ05086 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE3AQ05086 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3AQ05086 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3AQ05086 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE3AQ05086 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.93■□□□□ 0.62
UBE3AQ05086 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.93■□□□□ 0.62
UBE3AQ05086 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3AQ05086 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.93■□□□□ 0.62
UBE3AQ05086 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.93■□□□□ 0.62
UBE3AQ05086 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.93■□□□□ 0.62
UBE3AQ05086 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE3AQ05086 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.93■□□□□ 0.62
UBE3AQ05086 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3AQ05086 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.93■□□□□ 0.62
UBE3AQ05086 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE3AQ05086 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.93■□□□□ 0.62
UBE3AQ05086 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3AQ05086 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
UBE3AQ05086 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3AQ05086 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3AQ05086 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3AQ05086 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3AQ05086 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3AQ05086 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.92■□□□□ 0.62
UBE3AQ05086 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3AQ05086 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3AQ05086 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3AQ05086 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.92■□□□□ 0.62
UBE3AQ05086 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.92■□□□□ 0.62
UBE3AQ05086 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.92■□□□□ 0.62
UBE3AQ05086 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.92■□□□□ 0.62
UBE3AQ05086 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3AQ05086 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.92■□□□□ 0.62
UBE3AQ05086 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.92■□□□□ 0.62
UBE3AQ05086 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3AQ05086 AC002310.6-201ENST00000624451 1377 ntBASIC18.92■□□□□ 0.62
UBE3AQ05086 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3AQ05086 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3AQ05086 AC132938.6-201ENST00000623828 1655 ntBASIC18.92■□□□□ 0.62
UBE3AQ05086 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.92■□□□□ 0.62
UBE3AQ05086 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3AQ05086 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.91■□□□□ 0.62
UBE3AQ05086 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3AQ05086 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3AQ05086 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3AQ05086 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms