Protein–RNA interactions for Protein: P98155

VLDLR, Very low-density lipoprotein receptor, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLRP98155 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VLDLRP98155 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
VLDLRP98155 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VLDLRP98155 AC124067.4-201ENST00000519691 2379 ntBASIC16.79■□□□□ 0.28
VLDLRP98155 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VLDLRP98155 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VLDLRP98155 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.79■□□□□ 0.28
VLDLRP98155 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.79■□□□□ 0.28
VLDLRP98155 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VLDLRP98155 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VLDLRP98155 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
VLDLRP98155 AC100803.2-201ENST00000562459 1963 ntBASIC16.78■□□□□ 0.28
VLDLRP98155 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.78■□□□□ 0.28
VLDLRP98155 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VLDLRP98155 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.78■□□□□ 0.28
VLDLRP98155 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.78■□□□□ 0.28
VLDLRP98155 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.78■□□□□ 0.28
VLDLRP98155 AL355075.4-201ENST00000554988 638 ntBASIC16.78■□□□□ 0.28
VLDLRP98155 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
VLDLRP98155 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.78■□□□□ 0.28
VLDLRP98155 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.78■□□□□ 0.28
VLDLRP98155 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.78■□□□□ 0.28
VLDLRP98155 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.78■□□□□ 0.28
VLDLRP98155 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.78■□□□□ 0.28
VLDLRP98155 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.78■□□□□ 0.28
VLDLRP98155 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VLDLRP98155 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.78■□□□□ 0.28
VLDLRP98155 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
VLDLRP98155 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VLDLRP98155 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.78■□□□□ 0.28
VLDLRP98155 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
VLDLRP98155 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VLDLRP98155 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VLDLRP98155 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VLDLRP98155 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VLDLRP98155 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VLDLRP98155 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VLDLRP98155 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.77■□□□□ 0.28
VLDLRP98155 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VLDLRP98155 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.77■□□□□ 0.28
VLDLRP98155 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VLDLRP98155 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VLDLRP98155 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
VLDLRP98155 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VLDLRP98155 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VLDLRP98155 TSPY15P-201ENST00000457163 923 ntBASIC16.77■□□□□ 0.28
VLDLRP98155 NUDT16P1-203ENST00000513809 620 ntBASIC16.77■□□□□ 0.28
VLDLRP98155 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.77■□□□□ 0.28
VLDLRP98155 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.77■□□□□ 0.28
VLDLRP98155 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.77■□□□□ 0.28
VLDLRP98155 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VLDLRP98155 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.77■□□□□ 0.28
VLDLRP98155 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.77■□□□□ 0.28
VLDLRP98155 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.77■□□□□ 0.28
VLDLRP98155 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
VLDLRP98155 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
VLDLRP98155 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VLDLRP98155 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VLDLRP98155 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VLDLRP98155 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
VLDLRP98155 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VLDLRP98155 KRT8P7-201ENST00000533003 1432 ntBASIC16.77■□□□□ 0.27
VLDLRP98155 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
VLDLRP98155 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VLDLRP98155 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.77■□□□□ 0.27
VLDLRP98155 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
VLDLRP98155 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VLDLRP98155 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.77■□□□□ 0.27
VLDLRP98155 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.77■□□□□ 0.27
VLDLRP98155 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VLDLRP98155 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VLDLRP98155 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.76■□□□□ 0.27
VLDLRP98155 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
VLDLRP98155 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VLDLRP98155 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VLDLRP98155 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VLDLRP98155 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VLDLRP98155 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.76■□□□□ 0.27
VLDLRP98155 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
VLDLRP98155 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VLDLRP98155 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms