Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
IRX4P78413 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX4P78413 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX4P78413 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX4P78413 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
IRX4P78413 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
IRX4P78413 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IRX4P78413 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.68■□□□□ 0.58
IRX4P78413 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX4P78413 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.68■□□□□ 0.58
IRX4P78413 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
IRX4P78413 AL732292.2-201ENST00000609649 430 ntBASIC18.68■□□□□ 0.58
IRX4P78413 AL031008.1-201ENST00000619963 541 ntBASIC18.68■□□□□ 0.58
IRX4P78413 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX4P78413 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
IRX4P78413 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.68■□□□□ 0.58
IRX4P78413 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IRX4P78413 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
IRX4P78413 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX4P78413 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX4P78413 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX4P78413 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX4P78413 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IRX4P78413 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
IRX4P78413 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
IRX4P78413 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
IRX4P78413 AC073592.3-201ENST00000625118 1834 ntBASIC18.67■□□□□ 0.58
IRX4P78413 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IRX4P78413 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IRX4P78413 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
IRX4P78413 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IRX4P78413 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
IRX4P78413 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IRX4P78413 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
IRX4P78413 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.67■□□□□ 0.58
IRX4P78413 AL022342.1-201ENST00000400363 863 ntBASIC18.67■□□□□ 0.58
IRX4P78413 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.67■□□□□ 0.58
IRX4P78413 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.67■□□□□ 0.58
IRX4P78413 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.67■□□□□ 0.58
IRX4P78413 AC004263.2-201ENST00000617183 678 ntBASIC18.67■□□□□ 0.58
IRX4P78413 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
IRX4P78413 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.67■□□□□ 0.58
IRX4P78413 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.67■□□□□ 0.58
IRX4P78413 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IRX4P78413 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IRX4P78413 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IRX4P78413 AL162741.1-201ENST00000565563 1558 ntBASIC18.67■□□□□ 0.58
IRX4P78413 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
IRX4P78413 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
IRX4P78413 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IRX4P78413 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IRX4P78413 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.67■□□□□ 0.58
IRX4P78413 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
IRX4P78413 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
IRX4P78413 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
IRX4P78413 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
IRX4P78413 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
IRX4P78413 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.66■□□□□ 0.58
IRX4P78413 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IRX4P78413 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IRX4P78413 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.66■□□□□ 0.58
IRX4P78413 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.66■□□□□ 0.58
IRX4P78413 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IRX4P78413 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX4P78413 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX4P78413 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.66■□□□□ 0.58
IRX4P78413 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.66■□□□□ 0.58
IRX4P78413 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX4P78413 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
IRX4P78413 TSPY19P-201ENST00000418461 509 ntBASIC18.66■□□□□ 0.58
IRX4P78413 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.66■□□□□ 0.58
IRX4P78413 TSPY18P-201ENST00000441642 509 ntBASIC18.66■□□□□ 0.58
IRX4P78413 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.66■□□□□ 0.58
IRX4P78413 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.66■□□□□ 0.58
IRX4P78413 AC104692.2-201ENST00000603054 253 ntBASIC18.66■□□□□ 0.58
IRX4P78413 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.66■□□□□ 0.58
IRX4P78413 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
IRX4P78413 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
IRX4P78413 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX4P78413 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.66■□□□□ 0.58
IRX4P78413 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.66■□□□□ 0.58
IRX4P78413 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
IRX4P78413 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.66■□□□□ 0.58
IRX4P78413 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX4P78413 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX4P78413 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.66■□□□□ 0.58
IRX4P78413 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.65■□□□□ 0.58
IRX4P78413 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX4P78413 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX4P78413 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IRX4P78413 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX4P78413 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX4P78413 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX4P78413 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
IRX4P78413 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX4P78413 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX4P78413 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.65■□□□□ 0.58
IRX4P78413 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX4P78413 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX4P78413 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms