Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC12.61□□□□□ -0.39
CKS1BP61024 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12.61□□□□□ -0.39
CKS1BP61024 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.61□□□□□ -0.39
CKS1BP61024 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC12.61□□□□□ -0.39
CKS1BP61024 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC12.61□□□□□ -0.39
CKS1BP61024 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CKS1BP61024 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC12.6□□□□□ -0.39
CKS1BP61024 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.6□□□□□ -0.39
CKS1BP61024 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CKS1BP61024 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 UBALD1-205ENST00000590891 2641 ntBASIC12.6□□□□□ -0.39
CKS1BP61024 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC12.6□□□□□ -0.39
CKS1BP61024 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CKS1BP61024 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CKS1BP61024 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.6□□□□□ -0.39
CKS1BP61024 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CKS1BP61024 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC12.6□□□□□ -0.39
CKS1BP61024 AC026271.2-201ENST00000428091 497 ntBASIC12.6□□□□□ -0.39
CKS1BP61024 GATS-209ENST00000454084 1030 ntTSL 3 BASIC12.6□□□□□ -0.39
CKS1BP61024 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC12.6□□□□□ -0.39
CKS1BP61024 BET1L-207ENST00000529614 560 ntTSL 5 BASIC12.6□□□□□ -0.39
CKS1BP61024 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CKS1BP61024 PRKY-204ENST00000533551 1019 ntBASIC12.6□□□□□ -0.39
CKS1BP61024 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC12.6□□□□□ -0.39
CKS1BP61024 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CKS1BP61024 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CKS1BP61024 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
CKS1BP61024 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CKS1BP61024 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC12.6□□□□□ -0.39
CKS1BP61024 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.6□□□□□ -0.39
CKS1BP61024 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC12.6□□□□□ -0.39
CKS1BP61024 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.6□□□□□ -0.39
CKS1BP61024 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.6□□□□□ -0.39
CKS1BP61024 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.6□□□□□ -0.39
CKS1BP61024 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CKS1BP61024 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC12.6□□□□□ -0.39
CKS1BP61024 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CKS1BP61024 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
CKS1BP61024 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CKS1BP61024 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.59□□□□□ -0.39
CKS1BP61024 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC12.59□□□□□ -0.39
CKS1BP61024 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CKS1BP61024 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CKS1BP61024 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
CKS1BP61024 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC12.59□□□□□ -0.39
CKS1BP61024 AC083906.2-201ENST00000511578 360 ntBASIC12.59□□□□□ -0.39
CKS1BP61024 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.59□□□□□ -0.39
CKS1BP61024 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC12.59□□□□□ -0.39
CKS1BP61024 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms