Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB38P57729 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB38P57729 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB38P57729 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB38P57729 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB38P57729 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB38P57729 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB38P57729 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB38P57729 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB38P57729 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB38P57729 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB38P57729 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
RAB38P57729 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB38P57729 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB38P57729 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.86■□□□□ 0.29
RAB38P57729 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.86■□□□□ 0.29
RAB38P57729 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB38P57729 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB38P57729 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB38P57729 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.86■□□□□ 0.29
RAB38P57729 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RAB38P57729 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB38P57729 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB38P57729 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB38P57729 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB38P57729 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB38P57729 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB38P57729 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB38P57729 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB38P57729 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB38P57729 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB38P57729 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB38P57729 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB38P57729 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
RAB38P57729 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB38P57729 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
RAB38P57729 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RAB38P57729 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB38P57729 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RAB38P57729 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB38P57729 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB38P57729 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
RAB38P57729 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB38P57729 HCG4P8-203ENST00000443049 980 ntBASIC16.85■□□□□ 0.29
RAB38P57729 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
RAB38P57729 AC091607.1-201ENST00000490318 1060 ntBASIC16.85■□□□□ 0.29
RAB38P57729 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.85■□□□□ 0.29
RAB38P57729 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB38P57729 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB38P57729 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RAB38P57729 AC005336.2-201ENST00000593183 939 ntBASIC16.85■□□□□ 0.29
RAB38P57729 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB38P57729 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB38P57729 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB38P57729 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RAB38P57729 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB38P57729 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB38P57729 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB38P57729 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB38P57729 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB38P57729 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB38P57729 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB38P57729 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB38P57729 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RAB38P57729 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB38P57729 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB38P57729 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB38P57729 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB38P57729 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RAB38P57729 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RAB38P57729 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB38P57729 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RAB38P57729 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB38P57729 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB38P57729 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RAB38P57729 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.84■□□□□ 0.29
RAB38P57729 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.84■□□□□ 0.29
RAB38P57729 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.84■□□□□ 0.29
RAB38P57729 AP000867.3-201ENST00000524675 377 ntBASIC16.84■□□□□ 0.29
RAB38P57729 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB38P57729 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.84■□□□□ 0.29
RAB38P57729 AP005901.3-202ENST00000581653 237 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms