Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLDN8P56748 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN8P56748 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN8P56748 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN8P56748 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN8P56748 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CLDN8P56748 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN8P56748 LINC01568-207ENST00000641790 1380 ntBASIC17.07■□□□□ 0.32
CLDN8P56748 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
CLDN8P56748 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN8P56748 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN8P56748 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN8P56748 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN8P56748 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN8P56748 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.07■□□□□ 0.32
CLDN8P56748 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN8P56748 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN8P56748 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.07■□□□□ 0.32
CLDN8P56748 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN8P56748 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN8P56748 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN8P56748 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CLDN8P56748 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN8P56748 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN8P56748 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN8P56748 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN8P56748 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN8P56748 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN8P56748 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CLDN8P56748 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CLDN8P56748 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN8P56748 KRT89P-201ENST00000620027 1478 ntBASIC17.06■□□□□ 0.32
CLDN8P56748 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLDN8P56748 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN8P56748 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN8P56748 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN8P56748 OR6D1P-202ENST00000641007 5290 ntBASIC17.06■□□□□ 0.32
CLDN8P56748 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN8P56748 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLDN8P56748 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN8P56748 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN8P56748 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CLDN8P56748 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN8P56748 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN8P56748 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.06■□□□□ 0.32
CLDN8P56748 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN8P56748 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN8P56748 AC141257.4-201ENST00000634557 245 ntBASIC17.06■□□□□ 0.32
CLDN8P56748 AC136944.6-201ENST00000634818 245 ntBASIC17.06■□□□□ 0.32
CLDN8P56748 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN8P56748 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN8P56748 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN8P56748 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN8P56748 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN8P56748 HLA-J-201ENST00000462773 1622 ntBASIC17.06■□□□□ 0.32
CLDN8P56748 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CLDN8P56748 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN8P56748 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLDN8P56748 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CLDN8P56748 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN8P56748 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN8P56748 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN8P56748 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN8P56748 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN8P56748 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN8P56748 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CLDN8P56748 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN8P56748 KRT18P22-201ENST00000402024 1347 ntBASIC17.05■□□□□ 0.32
CLDN8P56748 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN8P56748 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN8P56748 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN8P56748 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN8P56748 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.05■□□□□ 0.32
CLDN8P56748 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN8P56748 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN8P56748 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
CLDN8P56748 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CLDN8P56748 KRT18P65-201ENST00000439811 1286 ntBASIC17.05■□□□□ 0.32
CLDN8P56748 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.05■□□□□ 0.32
CLDN8P56748 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.05■□□□□ 0.32
CLDN8P56748 AC024563.2-201ENST00000603282 481 ntBASIC17.05■□□□□ 0.32
CLDN8P56748 LINC01451-201ENST00000623792 534 ntBASIC17.05■□□□□ 0.32
CLDN8P56748 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN8P56748 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN8P56748 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN8P56748 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN8P56748 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN8P56748 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN8P56748 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN8P56748 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CLDN8P56748 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN8P56748 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN8P56748 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN8P56748 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN8P56748 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN8P56748 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN8P56748 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN8P56748 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN8P56748 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN8P56748 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms