Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMSP52788 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.84■□□□□ 0.29
SMSP52788 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMSP52788 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.84■□□□□ 0.29
SMSP52788 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SMSP52788 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMSP52788 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.84■□□□□ 0.29
SMSP52788 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SMSP52788 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMSP52788 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.84■□□□□ 0.29
SMSP52788 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SMSP52788 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SMSP52788 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMSP52788 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMSP52788 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMSP52788 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMSP52788 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.83■□□□□ 0.28
SMSP52788 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMSP52788 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMSP52788 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.83■□□□□ 0.28
SMSP52788 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMSP52788 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMSP52788 SPDYE15P-201ENST00000424157 909 ntBASIC16.83■□□□□ 0.28
SMSP52788 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMSP52788 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SMSP52788 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.83■□□□□ 0.28
SMSP52788 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMSP52788 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMSP52788 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.83■□□□□ 0.28
SMSP52788 AC012313.10-201ENST00000623509 926 ntBASIC16.83■□□□□ 0.28
SMSP52788 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SMSP52788 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SMSP52788 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SMSP52788 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.83■□□□□ 0.28
SMSP52788 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.83■□□□□ 0.28
SMSP52788 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMSP52788 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMSP52788 REXO1L9P-201ENST00000604264 2108 ntBASIC16.82■□□□□ 0.28
SMSP52788 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SMSP52788 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMSP52788 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.82■□□□□ 0.28
SMSP52788 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.82■□□□□ 0.28
SMSP52788 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.82■□□□□ 0.28
SMSP52788 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMSP52788 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMSP52788 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.82■□□□□ 0.28
SMSP52788 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMSP52788 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMSP52788 HBZP1-201ENST00000354915 429 ntBASIC16.82■□□□□ 0.28
SMSP52788 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMSP52788 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.82■□□□□ 0.28
SMSP52788 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.82■□□□□ 0.28
SMSP52788 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.82■□□□□ 0.28
SMSP52788 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.82■□□□□ 0.28
SMSP52788 AC111152.3-201ENST00000569699 673 ntBASIC16.82■□□□□ 0.28
SMSP52788 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.82■□□□□ 0.28
SMSP52788 AL121672.3-201ENST00000608644 468 ntBASIC16.82■□□□□ 0.28
SMSP52788 AC092119.3-201ENST00000612618 583 ntBASIC16.82■□□□□ 0.28
SMSP52788 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMSP52788 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.82■□□□□ 0.28
SMSP52788 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMSP52788 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.82■□□□□ 0.28
SMSP52788 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.82■□□□□ 0.28
SMSP52788 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMSP52788 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMSP52788 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMSP52788 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMSP52788 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMSP52788 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMSP52788 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.81■□□□□ 0.28
SMSP52788 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.81■□□□□ 0.28
SMSP52788 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMSP52788 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SMSP52788 RCC2P3-201ENST00000418112 1537 ntBASIC16.81■□□□□ 0.28
SMSP52788 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMSP52788 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.81■□□□□ 0.28
SMSP52788 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.81■□□□□ 0.28
SMSP52788 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMSP52788 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMSP52788 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SMSP52788 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMSP52788 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMSP52788 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.81■□□□□ 0.28
SMSP52788 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMSP52788 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMSP52788 AC004870.1-201ENST00000315132 882 ntBASIC16.81■□□□□ 0.28
SMSP52788 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.81■□□□□ 0.28
SMSP52788 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMSP52788 BX276092.5-203ENST00000456199 560 ntBASIC16.81■□□□□ 0.28
SMSP52788 RASA4DP-201ENST00000460726 1199 ntBASIC16.81■□□□□ 0.28
SMSP52788 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.81■□□□□ 0.28
SMSP52788 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.81■□□□□ 0.28
SMSP52788 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.81■□□□□ 0.28
SMSP52788 CR769767.2-201ENST00000622735 460 ntBASIC16.81■□□□□ 0.28
SMSP52788 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMSP52788 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMSP52788 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.81■□□□□ 0.28
SMSP52788 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SMSP52788 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SMSP52788 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms