Protein–RNA interactions for Protein: P52657

GTF2A2, Transcription initiation factor IIA subunit 2, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2P52657 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.57■□□□□ 0.88
GTF2A2P52657 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GTF2A2P52657 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
GTF2A2P52657 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A2P52657 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A2P52657 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
GTF2A2P52657 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A2P52657 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A2P52657 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A2P52657 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.56■□□□□ 0.88
GTF2A2P52657 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.56■□□□□ 0.88
GTF2A2P52657 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A2P52657 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.56■□□□□ 0.88
GTF2A2P52657 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A2P52657 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A2P52657 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.56■□□□□ 0.88
GTF2A2P52657 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.56■□□□□ 0.88
GTF2A2P52657 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
GTF2A2P52657 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.56■□□□□ 0.88
GTF2A2P52657 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.56■□□□□ 0.88
GTF2A2P52657 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
GTF2A2P52657 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.56■□□□□ 0.88
GTF2A2P52657 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.56■□□□□ 0.88
GTF2A2P52657 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
GTF2A2P52657 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A2P52657 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
GTF2A2P52657 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
GTF2A2P52657 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GTF2A2P52657 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GTF2A2P52657 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GTF2A2P52657 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GTF2A2P52657 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.55■□□□□ 0.88
GTF2A2P52657 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.55■□□□□ 0.88
GTF2A2P52657 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GTF2A2P52657 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GTF2A2P52657 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
GTF2A2P52657 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GTF2A2P52657 CALY-203ENST00000368558 825 ntTSL 5 BASIC20.55■□□□□ 0.88
GTF2A2P52657 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.55■□□□□ 0.88
GTF2A2P52657 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.55■□□□□ 0.88
GTF2A2P52657 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.55■□□□□ 0.88
GTF2A2P52657 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.55■□□□□ 0.88
GTF2A2P52657 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.55■□□□□ 0.88
GTF2A2P52657 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
GTF2A2P52657 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GTF2A2P52657 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.55■□□□□ 0.88
GTF2A2P52657 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GTF2A2P52657 PDPK2P-202ENST00000562415 1191 ntBASIC20.55■□□□□ 0.88
GTF2A2P52657 AL031432.2-201ENST00000566714 459 ntBASIC20.55■□□□□ 0.88
GTF2A2P52657 AL928711.1-201ENST00000570165 459 ntBASIC20.55■□□□□ 0.88
GTF2A2P52657 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.55■□□□□ 0.88
GTF2A2P52657 AC010654.1-201ENST00000615722 808 ntBASIC20.55■□□□□ 0.88
GTF2A2P52657 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
GTF2A2P52657 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GTF2A2P52657 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GTF2A2P52657 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF2A2P52657 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
GTF2A2P52657 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF2A2P52657 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
GTF2A2P52657 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF2A2P52657 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.54■□□□□ 0.88
GTF2A2P52657 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.54■□□□□ 0.88
GTF2A2P52657 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.54■□□□□ 0.88
GTF2A2P52657 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
GTF2A2P52657 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF2A2P52657 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.54■□□□□ 0.88
GTF2A2P52657 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.54■□□□□ 0.88
GTF2A2P52657 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.54■□□□□ 0.88
GTF2A2P52657 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF2A2P52657 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.54■□□□□ 0.88
GTF2A2P52657 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.54■□□□□ 0.88
GTF2A2P52657 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.54■□□□□ 0.88
GTF2A2P52657 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.54■□□□□ 0.88
GTF2A2P52657 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.54■□□□□ 0.88
GTF2A2P52657 AC027612.4-201ENST00000605371 583 ntBASIC20.54■□□□□ 0.88
GTF2A2P52657 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GTF2A2P52657 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.54■□□□□ 0.88
GTF2A2P52657 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.54■□□□□ 0.88
GTF2A2P52657 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF2A2P52657 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.54■□□□□ 0.88
GTF2A2P52657 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF2A2P52657 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
GTF2A2P52657 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF2A2P52657 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GTF2A2P52657 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.53■□□□□ 0.88
GTF2A2P52657 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GTF2A2P52657 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
GTF2A2P52657 AC132938.5-201ENST00000624980 1813 ntBASIC20.53■□□□□ 0.88
GTF2A2P52657 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GTF2A2P52657 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GTF2A2P52657 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
GTF2A2P52657 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GTF2A2P52657 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
GTF2A2P52657 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
GTF2A2P52657 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.53■□□□□ 0.88
GTF2A2P52657 SIGLEC30P-201ENST00000455569 941 ntBASIC20.53■□□□□ 0.88
GTF2A2P52657 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GTF2A2P52657 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
GTF2A2P52657 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
GTF2A2P52657 AC004877.2-201ENST00000623941 599 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms