Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NEK3P51956 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
NEK3P51956 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEK3P51956 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.49■□□□□ 0.55
NEK3P51956 AL163051.1-201ENST00000569214 1512 ntBASIC18.49■□□□□ 0.55
NEK3P51956 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEK3P51956 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
NEK3P51956 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.49■□□□□ 0.55
NEK3P51956 ATP5G2P1-201ENST00000433580 426 ntBASIC18.49■□□□□ 0.55
NEK3P51956 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.49■□□□□ 0.55
NEK3P51956 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.49■□□□□ 0.55
NEK3P51956 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.49■□□□□ 0.55
NEK3P51956 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.49■□□□□ 0.55
NEK3P51956 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.49■□□□□ 0.55
NEK3P51956 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.49■□□□□ 0.55
NEK3P51956 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEK3P51956 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEK3P51956 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEK3P51956 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEK3P51956 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEK3P51956 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.49■□□□□ 0.55
NEK3P51956 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.49■□□□□ 0.55
NEK3P51956 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.49■□□□□ 0.55
NEK3P51956 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK3P51956 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK3P51956 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK3P51956 AC090340.1-201ENST00000620778 4980 ntBASIC18.48■□□□□ 0.55
NEK3P51956 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NEK3P51956 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NEK3P51956 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK3P51956 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK3P51956 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK3P51956 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK3P51956 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK3P51956 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK3P51956 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NEK3P51956 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NEK3P51956 KRT18P48-201ENST00000434763 852 ntBASIC18.48■□□□□ 0.55
NEK3P51956 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.48■□□□□ 0.55
NEK3P51956 TSSC2-201ENST00000450217 709 ntBASIC18.48■□□□□ 0.55
NEK3P51956 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NEK3P51956 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.48■□□□□ 0.55
NEK3P51956 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NEK3P51956 AP003733.1-201ENST00000491725 852 ntBASIC18.48■□□□□ 0.55
NEK3P51956 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.48■□□□□ 0.55
NEK3P51956 KRT8P26-201ENST00000534154 1276 ntBASIC18.48■□□□□ 0.55
NEK3P51956 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.48■□□□□ 0.55
NEK3P51956 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.48■□□□□ 0.55
NEK3P51956 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK3P51956 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.48■□□□□ 0.55
NEK3P51956 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.48■□□□□ 0.55
NEK3P51956 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.48■□□□□ 0.55
NEK3P51956 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
NEK3P51956 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.48■□□□□ 0.55
NEK3P51956 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.48■□□□□ 0.55
NEK3P51956 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK3P51956 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
NEK3P51956 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NEK3P51956 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.47■□□□□ 0.55
NEK3P51956 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.47■□□□□ 0.55
NEK3P51956 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEK3P51956 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.47■□□□□ 0.55
NEK3P51956 MYLKP1-201ENST00000509077 1580 ntBASIC18.47■□□□□ 0.55
NEK3P51956 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NEK3P51956 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NEK3P51956 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NEK3P51956 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NEK3P51956 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEK3P51956 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.47■□□□□ 0.55
NEK3P51956 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.47■□□□□ 0.55
NEK3P51956 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEK3P51956 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.47■□□□□ 0.55
NEK3P51956 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.47■□□□□ 0.55
NEK3P51956 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.47■□□□□ 0.55
NEK3P51956 AC024563.2-201ENST00000603282 481 ntBASIC18.47■□□□□ 0.55
NEK3P51956 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.47■□□□□ 0.55
NEK3P51956 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEK3P51956 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEK3P51956 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.47■□□□□ 0.55
NEK3P51956 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NEK3P51956 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NEK3P51956 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEK3P51956 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
NEK3P51956 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEK3P51956 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
NEK3P51956 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEK3P51956 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
NEK3P51956 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEK3P51956 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEK3P51956 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.47■□□□□ 0.55
NEK3P51956 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NEK3P51956 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.47■□□□□ 0.55
NEK3P51956 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEK3P51956 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
NEK3P51956 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NEK3P51956 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.46■□□□□ 0.55
NEK3P51956 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEK3P51956 AC016734.2-201ENST00000624325 1377 ntBASIC18.46■□□□□ 0.55
NEK3P51956 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NEK3P51956 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms