Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPT1AP50416 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPT1AP50416 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPT1AP50416 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPT1AP50416 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CPT1AP50416 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPT1AP50416 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CPT1AP50416 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPT1AP50416 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPT1AP50416 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPT1AP50416 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPT1AP50416 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPT1AP50416 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.79■□□□□ 0.76
CPT1AP50416 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPT1AP50416 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPT1AP50416 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CPT1AP50416 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPT1AP50416 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CPT1AP50416 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.79■□□□□ 0.76
CPT1AP50416 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CPT1AP50416 AC108751.1-201ENST00000490852 363 ntBASIC19.79■□□□□ 0.76
CPT1AP50416 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.79■□□□□ 0.76
CPT1AP50416 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.79■□□□□ 0.76
CPT1AP50416 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.79■□□□□ 0.76
CPT1AP50416 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.79■□□□□ 0.76
CPT1AP50416 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.79■□□□□ 0.76
CPT1AP50416 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPT1AP50416 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPT1AP50416 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPT1AP50416 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.79■□□□□ 0.76
CPT1AP50416 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.79■□□□□ 0.76
CPT1AP50416 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.79■□□□□ 0.76
CPT1AP50416 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPT1AP50416 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CPT1AP50416 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPT1AP50416 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPT1AP50416 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPT1AP50416 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPT1AP50416 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.78■□□□□ 0.76
CPT1AP50416 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CPT1AP50416 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.78■□□□□ 0.76
CPT1AP50416 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPT1AP50416 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPT1AP50416 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CPT1AP50416 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CPT1AP50416 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
CPT1AP50416 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CPT1AP50416 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPT1AP50416 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPT1AP50416 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.78■□□□□ 0.76
CPT1AP50416 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPT1AP50416 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.78■□□□□ 0.76
CPT1AP50416 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.78■□□□□ 0.76
CPT1AP50416 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPT1AP50416 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.78■□□□□ 0.76
CPT1AP50416 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.78■□□□□ 0.76
CPT1AP50416 AC112482.1-201ENST00000492080 688 ntBASIC19.78■□□□□ 0.76
CPT1AP50416 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.78■□□□□ 0.76
CPT1AP50416 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CPT1AP50416 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CPT1AP50416 AC079781.4-201ENST00000641908 219 ntBASIC19.78■□□□□ 0.76
CPT1AP50416 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPT1AP50416 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPT1AP50416 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPT1AP50416 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.78■□□□□ 0.76
CPT1AP50416 AL353593.2-201ENST00000602529 1483 ntBASIC19.78■□□□□ 0.76
CPT1AP50416 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPT1AP50416 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPT1AP50416 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPT1AP50416 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPT1AP50416 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPT1AP50416 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPT1AP50416 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPT1AP50416 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPT1AP50416 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPT1AP50416 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.77■□□□□ 0.76
CPT1AP50416 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CPT1AP50416 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPT1AP50416 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CPT1AP50416 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
CPT1AP50416 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPT1AP50416 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CPT1AP50416 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.77■□□□□ 0.76
CPT1AP50416 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.77■□□□□ 0.76
CPT1AP50416 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.77■□□□□ 0.76
CPT1AP50416 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.77■□□□□ 0.76
CPT1AP50416 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.77■□□□□ 0.76
CPT1AP50416 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.77■□□□□ 0.76
CPT1AP50416 AC064836.3-201ENST00000607928 673 ntBASIC19.77■□□□□ 0.76
CPT1AP50416 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.77■□□□□ 0.76
CPT1AP50416 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CPT1AP50416 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CPT1AP50416 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CPT1AP50416 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CPT1AP50416 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CPT1AP50416 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPT1AP50416 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPT1AP50416 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPT1AP50416 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPT1AP50416 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms