Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
MMP13P45452 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.67■□□□□ 0.58
MMP13P45452 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP13P45452 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP13P45452 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
MMP13P45452 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.67■□□□□ 0.58
MMP13P45452 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.67■□□□□ 0.58
MMP13P45452 DUX4L26-201ENST00000489078 1255 ntBASIC18.67■□□□□ 0.58
MMP13P45452 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.67■□□□□ 0.58
MMP13P45452 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.67■□□□□ 0.58
MMP13P45452 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP13P45452 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
MMP13P45452 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.67■□□□□ 0.58
MMP13P45452 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
MMP13P45452 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MMP13P45452 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MMP13P45452 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP13P45452 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MMP13P45452 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.67■□□□□ 0.58
MMP13P45452 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP13P45452 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.67■□□□□ 0.58
MMP13P45452 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MMP13P45452 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP13P45452 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
MMP13P45452 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MMP13P45452 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP13P45452 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP13P45452 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.66■□□□□ 0.58
MMP13P45452 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP13P45452 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
MMP13P45452 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.66■□□□□ 0.58
MMP13P45452 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.66■□□□□ 0.58
MMP13P45452 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP13P45452 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.66■□□□□ 0.58
MMP13P45452 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP13P45452 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.66■□□□□ 0.58
MMP13P45452 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.66■□□□□ 0.58
MMP13P45452 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.66■□□□□ 0.58
MMP13P45452 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.66■□□□□ 0.58
MMP13P45452 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
MMP13P45452 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MMP13P45452 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MMP13P45452 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MMP13P45452 AL359075.1-203ENST00000462729 1002 ntBASIC18.66■□□□□ 0.58
MMP13P45452 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MMP13P45452 AC063952.2-201ENST00000498792 1227 ntBASIC18.66■□□□□ 0.58
MMP13P45452 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.66■□□□□ 0.58
MMP13P45452 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.66■□□□□ 0.58
MMP13P45452 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
MMP13P45452 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MMP13P45452 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.66■□□□□ 0.58
MMP13P45452 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.66■□□□□ 0.58
MMP13P45452 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.66■□□□□ 0.58
MMP13P45452 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP13P45452 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP13P45452 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP13P45452 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP13P45452 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP13P45452 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.66■□□□□ 0.58
MMP13P45452 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP13P45452 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP13P45452 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.65■□□□□ 0.58
MMP13P45452 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.65■□□□□ 0.58
MMP13P45452 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MMP13P45452 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MMP13P45452 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP13P45452 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP13P45452 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MMP13P45452 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MMP13P45452 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MMP13P45452 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP13P45452 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
MMP13P45452 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP13P45452 PVRIG2P-201ENST00000435460 978 ntBASIC18.65■□□□□ 0.58
MMP13P45452 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MMP13P45452 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.65■□□□□ 0.58
MMP13P45452 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP13P45452 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MMP13P45452 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP13P45452 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP13P45452 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP13P45452 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP13P45452 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
MMP13P45452 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.65■□□□□ 0.58
MMP13P45452 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.65■□□□□ 0.58
MMP13P45452 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.65■□□□□ 0.58
MMP13P45452 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP13P45452 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
MMP13P45452 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
MMP13P45452 AC022211.2-201ENST00000585075 2527 ntBASIC18.64■□□□□ 0.57
MMP13P45452 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MMP13P45452 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP13P45452 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.64■□□□□ 0.57
MMP13P45452 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP13P45452 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP13P45452 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MMP13P45452 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP13P45452 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP13P45452 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.64■□□□□ 0.57
MMP13P45452 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms