Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.09■□□□□ 0.33
KRT20P35900 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.09■□□□□ 0.33
KRT20P35900 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.09■□□□□ 0.33
KRT20P35900 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.09■□□□□ 0.33
KRT20P35900 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.09■□□□□ 0.33
KRT20P35900 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.09■□□□□ 0.33
KRT20P35900 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.09■□□□□ 0.33
KRT20P35900 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.09■□□□□ 0.33
KRT20P35900 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
KRT20P35900 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.09■□□□□ 0.33
KRT20P35900 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.09■□□□□ 0.33
KRT20P35900 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 NFIC-211ENST00000641145 8399 ntBASIC17.08■□□□□ 0.33
KRT20P35900 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.08■□□□□ 0.33
KRT20P35900 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT20P35900 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KRT20P35900 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
KRT20P35900 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
KRT20P35900 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KRT20P35900 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KRT20P35900 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.08■□□□□ 0.33
KRT20P35900 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
KRT20P35900 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT20P35900 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.08■□□□□ 0.33
KRT20P35900 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT20P35900 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KRT20P35900 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.08■□□□□ 0.33
KRT20P35900 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.08■□□□□ 0.32
KRT20P35900 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT20P35900 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
KRT20P35900 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KRT20P35900 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.08■□□□□ 0.32
KRT20P35900 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT20P35900 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.08■□□□□ 0.32
KRT20P35900 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT20P35900 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT20P35900 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT20P35900 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.08■□□□□ 0.32
KRT20P35900 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.08■□□□□ 0.32
KRT20P35900 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
KRT20P35900 AC034232.1-201ENST00000506026 1064 ntBASIC17.08■□□□□ 0.32
KRT20P35900 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.08■□□□□ 0.32
KRT20P35900 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KRT20P35900 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.08■□□□□ 0.32
KRT20P35900 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.08■□□□□ 0.32
KRT20P35900 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT20P35900 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
KRT20P35900 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KRT20P35900 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT20P35900 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KRT20P35900 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT20P35900 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT20P35900 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
KRT20P35900 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
KRT20P35900 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT20P35900 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 SIRPAP1-201ENST00000448467 1770 ntBASIC17.07■□□□□ 0.32
KRT20P35900 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT20P35900 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT20P35900 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT20P35900 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT20P35900 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT20P35900 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT20P35900 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 KRT8P50-201ENST00000562022 1438 ntBASIC17.07■□□□□ 0.32
KRT20P35900 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
KRT20P35900 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.07■□□□□ 0.32
KRT20P35900 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.07■□□□□ 0.32
KRT20P35900 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.07■□□□□ 0.32
KRT20P35900 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
KRT20P35900 AC104390.1-201ENST00000555663 520 ntBASIC17.07■□□□□ 0.32
KRT20P35900 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT20P35900 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 AL023973.1-201ENST00000624619 620 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms