Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HOXA11P31270 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXA11P31270 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HOXA11P31270 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA11P31270 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA11P31270 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HOXA11P31270 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.33■□□□□ 0.68
HOXA11P31270 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.33■□□□□ 0.68
HOXA11P31270 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.33■□□□□ 0.68
HOXA11P31270 AL671883.3-201ENST00000603274 991 ntBASIC19.33■□□□□ 0.68
HOXA11P31270 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.33■□□□□ 0.68
HOXA11P31270 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.33■□□□□ 0.68
HOXA11P31270 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA11P31270 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA11P31270 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXA11P31270 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA11P31270 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA11P31270 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
HOXA11P31270 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
HOXA11P31270 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXA11P31270 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA11P31270 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA11P31270 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
HOXA11P31270 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.33■□□□□ 0.68
HOXA11P31270 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA11P31270 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA11P31270 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA11P31270 AC079776.2-201ENST00000641154 1609 ntBASIC19.33■□□□□ 0.68
HOXA11P31270 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXA11P31270 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA11P31270 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA11P31270 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.32■□□□□ 0.68
HOXA11P31270 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HOXA11P31270 AL049757.1-201ENST00000616842 1596 ntBASIC19.32■□□□□ 0.68
HOXA11P31270 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA11P31270 SIRPAP1-201ENST00000448467 1770 ntBASIC19.32■□□□□ 0.68
HOXA11P31270 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXA11P31270 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.32■□□□□ 0.68
HOXA11P31270 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA11P31270 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA11P31270 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXA11P31270 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
HOXA11P31270 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA11P31270 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXA11P31270 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA11P31270 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
HOXA11P31270 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXA11P31270 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.32■□□□□ 0.68
HOXA11P31270 AC103564.2-201ENST00000432853 1299 ntBASIC19.32■□□□□ 0.68
HOXA11P31270 RPS2P1-201ENST00000434010 821 ntBASIC19.32■□□□□ 0.68
HOXA11P31270 SLC25A1P1-201ENST00000528351 927 ntBASIC19.32■□□□□ 0.68
HOXA11P31270 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.32■□□□□ 0.68
HOXA11P31270 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
HOXA11P31270 AC073592.4-201ENST00000623827 446 ntBASIC19.32■□□□□ 0.68
HOXA11P31270 AL020996.1-203ENST00000536896 2307 ntBASIC19.32■□□□□ 0.68
HOXA11P31270 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA11P31270 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA11P31270 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXA11P31270 AC009949.1-201ENST00000623048 1830 ntBASIC19.32■□□□□ 0.68
HOXA11P31270 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HOXA11P31270 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA11P31270 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
HOXA11P31270 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA11P31270 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXA11P31270 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.31■□□□□ 0.68
HOXA11P31270 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA11P31270 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXA11P31270 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXA11P31270 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA11P31270 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA11P31270 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HOXA11P31270 AC139887.3-201ENST00000568585 713 ntBASIC19.31■□□□□ 0.68
HOXA11P31270 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.31■□□□□ 0.68
HOXA11P31270 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
HOXA11P31270 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXA11P31270 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXA11P31270 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.31■□□□□ 0.68
HOXA11P31270 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.31■□□□□ 0.68
HOXA11P31270 AC116407.3-201ENST00000623905 1129 ntBASIC19.31■□□□□ 0.68
HOXA11P31270 AF228730.7-201ENST00000641842 219 ntBASIC19.31■□□□□ 0.68
HOXA11P31270 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA11P31270 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA11P31270 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA11P31270 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA11P31270 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXA11P31270 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA11P31270 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA11P31270 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA11P31270 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA11P31270 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.3■□□□□ 0.68
HOXA11P31270 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.3■□□□□ 0.68
HOXA11P31270 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.3■□□□□ 0.68
HOXA11P31270 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA11P31270 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA11P31270 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
HOXA11P31270 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HOXA11P31270 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA11P31270 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.3■□□□□ 0.68
HOXA11P31270 AC012640.2-201ENST00000561606 901 ntBASIC19.3■□□□□ 0.68
HOXA11P31270 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms