Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.8■□□□□ 0.28
CHMP24386 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHMP24386 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP24386 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CHMP24386 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP24386 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.8■□□□□ 0.28
CHMP24386 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP24386 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP24386 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CHMP24386 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.8■□□□□ 0.28
CHMP24386 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHMP24386 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP24386 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP24386 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP24386 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP24386 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CHMP24386 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP24386 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP24386 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP24386 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP24386 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHMP24386 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP24386 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP24386 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.79■□□□□ 0.28
CHMP24386 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP24386 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
CHMP24386 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP24386 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.79■□□□□ 0.28
CHMP24386 AL359075.1-203ENST00000462729 1002 ntBASIC16.79■□□□□ 0.28
CHMP24386 SEC1P-202ENST00000473944 940 ntBASIC16.79■□□□□ 0.28
CHMP24386 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.79■□□□□ 0.28
CHMP24386 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP24386 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.79■□□□□ 0.28
CHMP24386 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.79■□□□□ 0.28
CHMP24386 AC104390.1-201ENST00000555663 520 ntBASIC16.79■□□□□ 0.28
CHMP24386 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
CHMP24386 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.79■□□□□ 0.28
CHMP24386 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CHMP24386 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.79■□□□□ 0.28
CHMP24386 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.79■□□□□ 0.28
CHMP24386 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP24386 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP24386 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP24386 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP24386 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.79■□□□□ 0.28
CHMP24386 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.79■□□□□ 0.28
CHMP24386 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.79■□□□□ 0.28
CHMP24386 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP24386 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP24386 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP24386 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP24386 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP24386 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.79■□□□□ 0.28
CHMP24386 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.79■□□□□ 0.28
CHMP24386 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.78■□□□□ 0.28
CHMP24386 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CHMP24386 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CHMP24386 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.78■□□□□ 0.28
CHMP24386 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.78■□□□□ 0.28
CHMP24386 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.78■□□□□ 0.28
CHMP24386 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.78■□□□□ 0.28
CHMP24386 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.78■□□□□ 0.28
CHMP24386 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.78■□□□□ 0.28
CHMP24386 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP24386 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CHMP24386 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP24386 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP24386 GMCL1P1-201ENST00000463439 1581 ntBASIC16.77■□□□□ 0.28
CHMP24386 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CHMP24386 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP24386 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.77■□□□□ 0.28
CHMP24386 PHGDH-209ENST00000641074 1780 ntBASIC16.77■□□□□ 0.28
CHMP24386 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP24386 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP24386 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP24386 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP24386 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.77■□□□□ 0.28
CHMP24386 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP24386 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms