Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.88■□□□□ 0.77
ATP4AP20648 REXO1L9P-201ENST00000604264 2108 ntBASIC19.88■□□□□ 0.77
ATP4AP20648 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
ATP4AP20648 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP4AP20648 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP4AP20648 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.88■□□□□ 0.77
ATP4AP20648 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP4AP20648 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP4AP20648 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP4AP20648 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
ATP4AP20648 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ATP4AP20648 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP4AP20648 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP4AP20648 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ATP4AP20648 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP4AP20648 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP4AP20648 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
ATP4AP20648 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ATP4AP20648 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP4AP20648 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP4AP20648 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP4AP20648 AP005117.1-201ENST00000584346 1413 ntBASIC19.87■□□□□ 0.77
ATP4AP20648 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP4AP20648 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
ATP4AP20648 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP4AP20648 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP4AP20648 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP4AP20648 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP4AP20648 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.87■□□□□ 0.77
ATP4AP20648 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
ATP4AP20648 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.87■□□□□ 0.77
ATP4AP20648 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATP4AP20648 AC148477.8-201ENST00000624298 468 ntBASIC19.87■□□□□ 0.77
ATP4AP20648 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ATP4AP20648 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATP4AP20648 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
ATP4AP20648 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP4AP20648 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP4AP20648 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP4AP20648 NEFHP1-201ENST00000412845 2629 ntBASIC19.87■□□□□ 0.77
ATP4AP20648 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.86■□□□□ 0.77
ATP4AP20648 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.86■□□□□ 0.77
ATP4AP20648 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATP4AP20648 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP4AP20648 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.86■□□□□ 0.77
ATP4AP20648 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ATP4AP20648 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP4AP20648 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.86■□□□□ 0.77
ATP4AP20648 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP4AP20648 HLA-A-201ENST00000376802 1334 ntBASIC19.86■□□□□ 0.77
ATP4AP20648 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ATP4AP20648 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP4AP20648 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP4AP20648 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATP4AP20648 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.86■□□□□ 0.77
ATP4AP20648 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP4AP20648 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.86■□□□□ 0.77
ATP4AP20648 ABCD1P5-201ENST00000445663 754 ntBASIC19.86■□□□□ 0.77
ATP4AP20648 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP4AP20648 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
ATP4AP20648 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.86■□□□□ 0.77
ATP4AP20648 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.86■□□□□ 0.77
ATP4AP20648 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
ATP4AP20648 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.86■□□□□ 0.77
ATP4AP20648 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP4AP20648 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ATP4AP20648 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ATP4AP20648 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP4AP20648 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.86■□□□□ 0.77
ATP4AP20648 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP4AP20648 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.86■□□□□ 0.77
ATP4AP20648 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP4AP20648 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATP4AP20648 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
ATP4AP20648 AP000997.3-201ENST00000623333 2250 ntBASIC19.85■□□□□ 0.77
ATP4AP20648 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP4AP20648 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATP4AP20648 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.85■□□□□ 0.77
ATP4AP20648 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.85■□□□□ 0.77
ATP4AP20648 AP000347.1-202ENST00000435868 847 ntBASIC19.85■□□□□ 0.77
ATP4AP20648 FAM197Y8-203ENST00000450145 560 ntBASIC19.85■□□□□ 0.77
ATP4AP20648 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.85■□□□□ 0.77
ATP4AP20648 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ATP4AP20648 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.85■□□□□ 0.77
ATP4AP20648 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.85■□□□□ 0.77
ATP4AP20648 MTDHP3-201ENST00000594186 672 ntBASIC19.85■□□□□ 0.77
ATP4AP20648 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.85■□□□□ 0.77
ATP4AP20648 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP4AP20648 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.85■□□□□ 0.77
ATP4AP20648 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.85■□□□□ 0.77
ATP4AP20648 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
ATP4AP20648 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATP4AP20648 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP4AP20648 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP4AP20648 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.85■□□□□ 0.77
ATP4AP20648 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.85■□□□□ 0.77
ATP4AP20648 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP4AP20648 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP4AP20648 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP4AP20648 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms